Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02278 ATGAGGCAAATTAAGAAGTCAGGTTCCAAATTAACGTATTTTATGGTCTGGTGTTTTCTGGCTTTGAATTGCTTTCAAGAGTTTGGATCCGACGCTCAACTCATACCACAAGATGAAGTGAAAGCTCTACAAGCAATATCGGATAAACTAAAGAACGTGAATTGGAAAGTGGCAGAACGTTCCTGCATTGAGCTTGACGGAGGCTTTAATAATAACAATAACAATATAAGTGATGAATTTGTGAGGAATGTCACTTGCGATTGCACTTTCCAAAATAACACCGTTTGCCATATTACTAGCATCTTTCTAAAGGGTCAAAATATATCTGGAGTTATGCCCAGTGAATTTGGAAATCTTACTCAATTAAAAGTACTCGATCTTACTCGCAACTATCTCAATGGCTCAATTCCAACGAGTTTTGCTACCAACTCGCTAGTTGTTTTGTCACTTTTAGGAAACCGATTAAGTGGTCCAATTCCCAAAGAAATTGGTGATATTGCTAGCTTGGAGGATCTGGTCCTAGAAAATAATCAACTAGGAGGACCACTTCCTCCTAGTCTTGGAAATTTGAGCAAGTTGAAGAGACTACTTCTTTCTTCAAATAATTTTACTGGGACAATACCTGAAACATTTAGCAAATTAAAGAATCTCACTGACTTTAGGATTGATGGAAGCAGTTTATCTGGACAGATACCTAATTTTATTGGGAATTGGACCAAACTTGACAGATTGGATATGCAGGGAATATCTATGCAAGGTCCAATTCCCCGCACCATATCTGAGTTAAAACTTTTGACTGAATTGAGAGTAACCGATTTGAATGGACCAACTATGACATTTCCTAATTTGAAGGATTTGAAAAACTTGCAACTACTGGAGTTGAGAAATTGCCTAATCACAGGTCCTATTCCTGATTACATTGGTGAAATGACAAACTTAATTACTTTAGATCTAAGCTTCAATATGTTGACTGGTTCAATCCCAAATTCAATTCAAGGATTGAGAAGTCTAGATTACATGTTTCTTACTAATAATTCTTTGACTGGACCGATTCAAGACTGGATACTGAACTTCAAAATTAACATAGATTTATCTTACAACAATTTCACAAAGTCATCTGCAACTAGCTGCCAGCAGTTGAATCTGAACTTGGCTTCAAGCCATTCTTCTTTGGCTGTCACTTCACCTTCAACGTTGTGTTTGAAGAGGAGTCTTCCTTGTGCAGGAAAACCCCAGTATTATTCATTGTTCATAAATTGTGGAGGTCCTGAAGAGGATTTTGAGGGAAATCACTATGTAGGAGACCTGCAGAATGATGGCATTTCAAACTTTGATCTCAGAAATGCAGGACAATGGGCTTTTAGCAGCACAGGAGAGTATATGGGAAAAGTTGATGCAGATTATACAGCATCAAATGCATTTTCATTGAATATTAGTGGTCCAGATTATTATCAAACCGCCCGAATTTCCCCTCTATCACTTAACTACTATGGCCTTTGTATGTTAAATGGAAATTATAAAGTGAAGCTGCATTTTGCTGAGATAATGTTTTCTGATGACCAGACTTTTAGCAGTCTTGGAAGACGCATATTTGACGTTTCAATTCAAGGTTTTAAATATTTGAAAGATTTTAACATTATGGAAGAAGCTGGTGGAGTTGGAAAGGGAATCACTAAGGAATTCGATGTCGATGTCAACGACAACACCTTGGAAATTCACTTGTACTGGGCAGGGAAAGGAACCACTGCCATTCCTGATATAAGTGTATATGGACCTCTTATATCTGCTATCACAGTTACACCAAACTTTAAAAATCATTCAGGAGGACTGTCTGCTGGAGCCATTGTTGGAATTGTGGCTGCATCATGTGTTCTTGTCATGCTGATATTGGCTACCCTTTGGGAGATGGGTTTGTTTGGCCAAAAAGATACTGCAGACAAAGACCTTCTTGATCTTAAAACAGGTTATTTCAGCTTAAGACAAATTAAAGCAGCCACTAATGACTTCGACCCTGCAAATAAGATTGGTGAAGGGGGATTTGGGCCAGTATACAAGGGTGTTCTATCAGATGGTTATGTCATTGCTGTTAAGCAACTCTCCTCCAAATCAAGGCAAGGGAACCGTGAATTTGTTAACGAAATCGGATTGATATCTGCTTTGCAGCATCCAAATCTTGTTAAGCTTTATGGCTGTTGCATTGAAGAAAAACAGTTGCTGCTGATATATGAATACATGGAGAACAATTGTCTTGGTCGTGCACTTTTTGGTCATCAAGGACAGAAGCTGCAATTAGACTGGCCTACAAGAATGAAGATCTGTCTTGGTATAGCAAAAGGATTAGCTTATCTTCATGAAGAATCACCATTGAAAATAGTACACAGAGACATTAAGGCAACTAATGTATTACTTGACAAGGATCTGAGTGCCAAGATCTCTGATTTTGGTTTAGCCAAGCTTGATGAAGAAGGGAATACACATATTAGTACACGGATAGCAGGAACAATTGGATACATGGCTCCAGAATATGCTATGCGGGGTTACTTGACTGATAAGGCAGATGTATATAGTTTTGGAGTTGTAGCTTTGGAGATCGTTAGCGGAAAAAGCAACACAGATTACATGCCAAAGGAGGAGTTTATATATCTTCTAGATTGGGCCTTTGTTCTTCAAGAGCAAGGGAAGCTTTTGGAGTTGGTGGATCCAAGTCTTGATTCAAGATACTCCCAAAAGGAGGCCATGAGAATGCTGAATTTGGCATTGTTATGCACCAACAAATCTTCCACTCATAGGCCATCCATGTCATTGGTAGTAAGCATGCTTGAAGGAAAAACTCCAATCCAAGCGCCGGTAATCAAGCGCGGTGAGAGCGGCAGACACTCAAGATACAAAGCCTCTGAGTTGCTGTCACAAGATACCCAACCTCTTGTTTCCTCATTATCACACAGAAGCATAGAACAAAGAGACGAATCGATTCACTCTTCCATATCTCTTCAAAGTGAACAAGAATTTTCTTCAAGTAGAAAACTTCCTTGA 3033 0.3884 MRQIKKSGSKLTYFMVWCFLALNCFQEFGSDAQLIPQDEVKALQAISDKLKNVNWKVAERSCIELDGGFNNNNNNISDEFVRNVTCDCTFQNNTVCHITSIFLKGQNISGVMPSEFGNLTQLKVLDLTRNYLNGSIPTSFATNSLVVLSLLGNRLSGPIPKEIGDIASLEDLVLENNQLGGPLPPSLGNLSKLKRLLLSSNNFTGTIPETFSKLKNLTDFRIDGSSLSGQIPNFIGNWTKLDRLDMQGISMQGPIPRTISELKLLTELRVTDLNGPTMTFPNLKDLKNLQLLELRNCLITGPIPDYIGEMTNLITLDLSFNMLTGSIPNSIQGLRSLDYMFLTNNSLTGPIQDWILNFKINIDLSYNNFTKSSATSCQQLNLNLASSHSSLAVTSPSTLCLKRSLPCAGKPQYYSLFINCGGPEEDFEGNHYVGDLQNDGISNFDLRNAGQWAFSSTGEYMGKVDADYTASNAFSLNISGPDYYQTARISPLSLNYYGLCMLNGNYKVKLHFAEIMFSDDQTFSSLGRRIFDVSIQGFKYLKDFNIMEEAGGVGKGITKEFDVDVNDNTLEIHLYWAGKGTTAIPDISVYGPLISAITVTPNFKNHSGGLSAGAIVGIVAASCVLVMLILATLWEMGLFGQKDTADKDLLDLKTGYFSLRQIKAATNDFDPANKIGEGGFGPVYKGVLSDGYVIAVKQLSSKSRQGNREFVNEIGLISALQHPNLVKLYGCCIEEKQLLLIYEYMENNCLGRALFGHQGQKLQLDWPTRMKICLGIAKGLAYLHEESPLKIVHRDIKATNVLLDKDLSAKISDFGLAKLDEEGNTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTDYMPKEEFIYLLDWAFVLQEQGKLLELVDPSLDSRYSQKEAMRMLNLALLCTNKSSTHRPSMSLVVSMLEGKTPIQAPVIKRGESGRHSRYKASELLSQDTQPLVSSLSHRSIEQRDESIHSSISLQSEQEFSSSRKLP 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02278 1010 Gene3D - 412 603 - -
Car07g02278 1010 Gene3D Ribonuclease Inhibitor 45 272 IPR032675 -
Car07g02278 1010 CDD STKc_IRAK 675 942 - -
Car07g02278 1010 Pfam Malectin domain 415 597 IPR021720 -
Car07g02278 1010 Pfam Leucine Rich Repeat 192 214 IPR001611 GO:0005515
Car07g02278 1010 SUPERFAMILY L domain-like 81 378 - -
Car07g02278 1010 Pfam Protein tyrosine and serine/threonine kinase 673 939 IPR001245 GO:0004672|GO:0006468
Car07g02278 1010 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 76 989 - -
Car07g02278 1010 PANTHER - 76 989 - -
Car07g02278 1010 ProSiteProfiles Protein kinase domain profile. 669 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02278 1010 Gene3D Ribonuclease Inhibitor 273 389 IPR032675 -
Car07g02278 1010 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Car07g02278 1010 Gene3D Phosphorylase Kinase; domain 1 637 744 - -
Car07g02278 1010 MobiDBLite consensus disorder prediction 990 1010 - -
Car07g02278 1010 MobiDBLite consensus disorder prediction 978 1010 - -
Car07g02278 1010 SUPERFAMILY Protein kinase-like (PK-like) 654 947 IPR011009 -
Car07g02278 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
Car07g02278 1010 SMART serkin_6 669 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02278 1010 Gene3D Transferase(Phosphotransferase) domain 1 745 951 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02278 Car-Chr7 35078819 35101701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02278 24 990 Receptor kinase-like Gene Family AT1G53440 60.838 0.0 1170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car07g02278 PK_Tyr_Ser-Thr 5e-50 CL0016