Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01887 ATGCCATCAAATAATTTCAAAAACACACCTTCAACTAAACAAGATCATGAAAACCAACAAGGTTCTTGTTCTTCTTTAGATTCCAAAAAACCACCAACAAGACCATCATCATCACAAAATCAACAAGGAGTTATAAAATGTCCAAGATGTGACTCTCCCAACACAAAATTCTGCTACTACAACAACTATAGCCTCACACAACCAAGACACTTTTGCAAAACTTGTAGAAGATATTGGACTAATGGTGGAGCCTTGAGAAATGTTCCAATTGGTGGTGGTTGTAGAAAGAAACAAAAGCTCAAAACTTCATCAAGGTTCTCATCATGTAATGAATCCATTAACAAGTTTTCACCTTCCCTTGATTTTCATCTTGGTAATTTACCTTTACCTTTACTACCCTTTTCTCCAAAGCTTCACCTTCATAATTTTCAACCTTCTTTCTATAATAATAACCAATTCTCTTCAAATTCAAACACTACAACTTCTTCAACTTTCCAACTTGATCCATCTAGTACTAGCTCAAATTCATTGATGGGTCTAAATTTATACCCTTTTTCATCTACAATTGGAAGTGGATTATTCAATGGTGCAAATGAAAATCCAATTCAACAAGGAATGAATCTCATGAATGTGAATTctacttctactactagtaacagtactagtcttgctactTCTATTGAATCATTGAGTTCTATGAACCAAGATTTGCACTTGAAGCTTCAACAACAAAGATTAGCAACAATGTTTGGTGGTGGAGATAATGATAACAAGAAAGAACAAAGTAGCAATGTTTTGACTCAACCAATTTTGTTTCAGAATCTTGATGTTTCAAAGACAGAGATGTTTGGTGATTTAAGAAAAGATCAAGGTTCAAGTGGTGATGTACCAATGGAATGGTTTTTTGGTAATTCTTATTCATCAATGATAACTCCAACAACAACAATTAATGGTGGTAATGATAATGGAAACAACAATTGGAGTAATGGTGTTAATGTTTGGGGTGATGTTCAGCAGCAACAACCATATACTGCTTTGCCCTAG 1044 0.3285 MPSNNFKNTPSTKQDHENQQGSCSSLDSKKPPTRPSSSQNQQGVIKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTNGGALRNVPIGGGCRKKQKLKTSSRFSSCNESINKFSPSLDFHLGNLPLPLLPFSPKLHLHNFQPSFYNNNQFSSNSNTTTSSTFQLDPSSTSSNSLMGLNLYPFSSTIGSGLFNGANENPIQQGMNLMNVNSTSTTSNSTSLATSIESLSSMNQDLHLKLQQQRLATMFGGGDNDNKKEQSSNVLTQPILFQNLDVSKTEMFGDLRKDQGSSGDVPMEWFFGNSYSSMITPTTTINGGNDNGNNNWSNGVNVWGDVQQQQPYTALP 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01887 347 ProSiteProfiles Zinc finger Dof-type profile. 45 99 IPR003851 GO:0003677|GO:0006355
Car07g01887 347 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN-RELATED 35 346 - -
Car07g01887 347 ProSitePatterns Zinc finger Dof-type signature. 47 83 IPR003851 GO:0003677|GO:0006355
Car07g01887 347 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 35 346 IPR045174 GO:0003700|GO:0006355
Car07g01887 347 Pfam Dof domain, zinc finger 44 99 IPR003851 GO:0003677|GO:0006355
Car07g01887 347 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01887 Car-Chr7 21226304 21227599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01887 10 347 C2C2-Dof Transcription Factor Family AT5G65590 38.483 1.68e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car07g01887 zf-Dof 5.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01887 - - cam:101501747 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00993 08 9316695 9318321 Car07g01887 07 21226304 21227599 PCT