Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01481 ATGCCTTCCTCTGACTCCGGTGACAGCCGCCGATCAACTAAACCTCAGAATCGCCCCGGTGCACCGGTGCCGGAACAAGAGAATCTCCCATGTCCTCGTTGCGATTCAACTAACACAAAGTTCTGCTACTACAACAACTACAATTACTCTCAGCCACGCCACTTTTGCAAGGCTTGCCGCCGATATTGGACTCAAGGCGGCACTCTCCGGGACATCCCCGTCGGAGGAGGTAACCGGAAAAACGCCAAACGTTCCCGCACTCATCACGTTGCTGTTACCTCCTCGTCTTCTGTGACTTCGGCGCCGGAGCATCATTTTCAATCGATGGCGCCGATCTCTGCCGCACAAGGAGGTTCCTTACCGTTCGGAGGTGGAATTGACGGTGAAGGGAAACAGAATGTGAGTGGTTGTGGGAGTTTCACTTCGTTGCTGAACAACAACGTTCAAAACTCTGGATTTCTGGCTTTAGGTGGATttgggcttggagaaatgggctttgggattgggcgagcgggttggggttTTCCGGGAATGGTGGATGGGTCGAACATGGGCGTGTCTTCTGGGATTGGAAACACGTGGCAGTTAGAAGGCGGTGAAGGTGGATTTGTTGGTGCTGCCGACTGTTTCTCTTGGCCTGGACTTGCAATTTCAACACCGGGAAATGTTCTTAAATGA 678 0.4853 MPSSDSGDSRRSTKPQNRPGAPVPEQENLPCPRCDSTNTKFCYYNNYNYSQPRHFCKACRRYWTQGGTLRDIPVGGGNRKNAKRSRTHHVAVTSSSSVTSAPEHHFQSMAPISAAQGGSLPFGGGIDGEGKQNVSGCGSFTSLLNNNVQNSGFLALGGFGLGEMGFGIGRAGWGFPGMVDGSNMGVSSGIGNTWQLEGGEGGFVGAADCFSWPGLAISTPGNVLK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01481 225 MobiDBLite consensus disorder prediction 1 30 - -
Car07g01481 225 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 222 IPR045174 GO:0003700|GO:0006355
Car07g01481 225 ProSiteProfiles Zinc finger Dof-type profile. 29 83 IPR003851 GO:0003677|GO:0006355
Car07g01481 225 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 222 - -
Car07g01481 225 ProSitePatterns Zinc finger Dof-type signature. 31 67 IPR003851 GO:0003677|GO:0006355
Car07g01481 225 MobiDBLite consensus disorder prediction 74 101 - -
Car07g01481 225 MobiDBLite consensus disorder prediction 1 16 - -
Car07g01481 225 Pfam Dof domain, zinc finger 27 83 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01481 Car-Chr7 14252201 14253404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01481 1 225 C2C2-Dof Transcription Factor Family AT3G50410 46.667 2.43e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car07g01481 zf-Dof 1.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01481 - - cam:101488684 409.838