Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01480 ATGTCTCTGTTTTCAACACCAACATATtctcactctctctctcgtcccattcattcatttcccacactttctctctctatcacttctttctttcCCATAAATAAAACTCTATTCCATTACACTCTTCCTCTTCTTCATAACACAATCCCCACTTTCATTTTACTTTTTCAAACTAAAACTTCTTTGCTCACTCTCTCAACATCTTTCATCTTTCGTAACTACACAATGCCTTCCTCTGACTCCGCTGACAGCCGCCGATCAACTAAACCTCAGACTCGCCCCGGAGCACCGGCGCCTGAGCAAGAGAATCTTCCATGCCCTCGTTGCGATTCAACAAACACCAAATTCTGCTACTACAACAACTATAACTACTCTCAGCCACGTCACTTCTGCAAGGCTTGCCGCCGATACTGGACTCACGGAGGAACTCTCCGTGACATTCCCGTCGGAGGAGGTACCCGGAAAAACGCCAAACGCTCTCGCACTCATCACGTTGCTGTCACCTCCTCGTCTTCTACCGTGACTTCGGCGCCGGAGCATCACTTTCATTCTATGGCGCCGATCTCCGCCGCACAAGGAGGTTCGTTACCGTTCGGTGGTGGAATTGACGGTGACGGAAAACAGAATATGAGTGTTTGTGGGAGTTTCACTTCGTTGCTGAACAACAACGTTCAAAACTCTGGTTTTCTGGCTTTAGGTGGATttgggcttgggcttgaagaaatgggctttggaattgggcgagcgggttggggttTTCCGGGAATGGTGGAGGGGTCGAACATGGGCGTGTCTTCTGGGATTGGAAACACGTGGCAGTTAGAAGGCGGTGAAGGTGGATTTGTTGGTGCTGCTGACTGTTTCTCTTGGCCTGGACTTGCAATTTCAACACAAGGAAATGGTTTCAAATGA 912 0.42 MSLFSTPTYSHSLSRPIHSFPTLSLSITSFFPINKTLFHYTLPLLHNTIPTFILLFQTKTSLLTLSTSFIFRNYTMPSSDSADSRRSTKPQTRPGAPAPEQENLPCPRCDSTNTKFCYYNNYNYSQPRHFCKACRRYWTHGGTLRDIPVGGGTRKNAKRSRTHHVAVTSSSSTVTSAPEHHFHSMAPISAAQGGSLPFGGGIDGDGKQNMSVCGSFTSLLNNNVQNSGFLALGGFGLGLEEMGFGIGRAGWGFPGMVEGSNMGVSSGIGNTWQLEGGEGGFVGAADCFSWPGLAISTQGNGFK 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01480 303 ProSiteProfiles Zinc finger Dof-type profile. 104 158 IPR003851 GO:0003677|GO:0006355
Car07g01480 303 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 76 300 IPR045174 GO:0003700|GO:0006355
Car07g01480 303 MobiDBLite consensus disorder prediction 163 177 - -
Car07g01480 303 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 76 300 - -
Car07g01480 303 MobiDBLite consensus disorder prediction 77 91 - -
Car07g01480 303 Pfam Dof domain, zinc finger 102 158 IPR003851 GO:0003677|GO:0006355
Car07g01480 303 MobiDBLite consensus disorder prediction 149 177 - -
Car07g01480 303 MobiDBLite consensus disorder prediction 77 105 - -
Car07g01480 303 ProSitePatterns Zinc finger Dof-type signature. 106 142 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01480 Car-Chr7 14238499 14239871 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01480 76 303 C2C2-Dof Transcription Factor Family AT3G50410 46.667 9.53e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car07g01480 zf-Dof 1.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01480 - - cam:101488684 588.956