Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01476 ATGATCCAAGAACTCTTTGGAGAAAGAAACTACTCTTCCATTAATggaggaggaggaggaggaggTGTTTTACTTCAACCACTCACACAATCTCCTTCTAATTCTCAAGCTCCATCTTccacaaccaccatcacaaccaccgtcacttccaccaccaccaccaccaccTCATCAGAAAACCAAAACCTAAGGTGTCCACGATGCGATTCATCGAACACCAAATTTTGTTACTACAACAATTACAACCTCACTCAGCCTCGTCATTTCTGCAAGACTTGTCGCCGTTATTGGACAAAAGGCGGCGCTTTAAGAAACGTACCTATCGGAGGTGGCTGCCGGAAAAACAAGAACATCGGTGTGTCAAACACCGCGGCAAAAACAAGCGCTAATAAGATGAAAATGGTTGCATCGGAGTTTATTGGAAGGTCAGTACATGGTCAGGGGTTCGATCTAGAACATATGGTTCCACCAACAAGTCAAATCTTATGGGGTTCTCCTCAAAACTCTCATCTACTTTCTTTACTAAGATCTAACCAAACCCAAAACCCTAACCCTAACCATGTTACAACAAAGGAAGAAGAGAATATTAACTTAATGGGCTCATCATCATCTCATTCTCACATGATGACTTCTGAGCCGTTGATTTCAAATATGTTGGTCAATCAACGAACAACAGGAGGACTTGTCAATAGCTATGATGGTGTTGGTCATGTACTATGCAACCCATTTTGGAGAAACAATCAAAATGGTAACTTTGTACTTGGAGaacaacaacaccaacatcatcatcaaaacagtgaaatccatcaactttaccagaagctaaggtcatcaacatcatcatcatcTGGtaataataataataataattatTGTAGTGAGATCTCAGGTGCACCAGTGTTTTTAGGGAACGTGGCTACTAATTCTTCTTCTATATCAAATATTTTGGAAACAACTTTCTCAGTTGGTGGTGGTGGTGAATTAGGGTACTGGAATCCAACTCTTTCTTGGTCTGATCTTCAAACCACCAATGGTAGTACTCCTTATCCGTAA 1053 0.339 MIQELFGERNYSSINGGGGGGGVLLQPLTQSPSNSQAPSSTTTITTTVTSTTTTTTSSENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNIGVSNTAAKTSANKMKMVASEFIGRSVHGQGFDLEHMVPPTSQILWGSPQNSHLLSLLRSNQTQNPNPNHVTTKEEENINLMGSSSSHSHMMTSEPLISNMLVNQRTTGGLVNSYDGVGHVLCNPFWRNNQNGNFVLGEQQHQHHHQNSEIHQLYQKLRSSTSSSSGNNNNNNYCSEISGAPVFLGNVATNSSSISNILETTFSVGGGGELGYWNPTLSWSDLQTTNGSTPYP 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01476 350 ProSitePatterns Zinc finger Dof-type signature. 65 101 IPR003851 GO:0003677|GO:0006355
Car07g01476 350 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 346 IPR045174 GO:0003700|GO:0006355
Car07g01476 350 PANTHER DOF ZINC FINGER PROTEIN DOF5.1-LIKE 12 346 - -
Car07g01476 350 ProSiteProfiles Zinc finger Dof-type profile. 63 117 IPR003851 GO:0003677|GO:0006355
Car07g01476 350 MobiDBLite consensus disorder prediction 22 62 - -
Car07g01476 350 MobiDBLite consensus disorder prediction 26 62 - -
Car07g01476 350 Pfam Dof domain, zinc finger 61 117 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01476 Car-Chr7 14190000 14191797 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01476 31 127 C2C2-Dof Transcription Factor Family AT5G65590 55.670 7.21e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car07g01476 zf-Dof 3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01476 - - vra:106766838 352.443