Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00937 ATGCAAGAAACTAGAGATTCTACGATCAGCCTCTTCGGCCACAAAATTCCCCTGTCCGCCGGCGACAGAGACGGTGGTGAAGGTTATGAAGGGGAACAAGAACTACATGAAGAAAAATATCAAACACACGAGGATCCAGAAGCTGAAAATGTCACCGAGAGAGTGCAAGAAACTTATCCTCCTTCAAATCTAGAAGAGGCTGAGAATTCAGGCAATTCATCACCTGAGGGTATCACAAACCTGAAAACACCTTCCATAGAAGAAGAGATTGCAAAATCAAAAGATGACAAGTCGGAGAAGGAACAATCACAAGAGAAAACACTGAAGAAGCCCGATAAATTGCTACCATGTCCTCGATGCAATAGCATGGACACTAAATTCTGTTACTACAACAACTACAATGTCAACCAGCCACGTTATTTCTGCAGAGCCTGTCAAAGATACTGGACTGCAGGTGGCGCCACGAGGAATGTTCCAGTTGGGGCAGGACGGCGAAAGAATAAGAACTCTGCCTCACATTATAACCACATAACTATCTCTGAGGCTCTTCAAGAAGCTACAATAGATTCTCCTAATGGAACGCATATTCACAGTTTGAAAAGCAATGGTAGAGTCATCAGCTTTGGATCAGATGCACCTATTTGTGACTCCATGGCATCTGTCCAAAACACTGGAGAGAAAAAGGTTGTTGATGGTACAAGAAATAGATTTCATGGCTTAGAGGATCAAAGTTTACATGGAGAAAATGGTGATGAGTACTCAAGTGTATCAAATTCAATGGGAGAAAGTAACAAGAGTACTACTAGTACCTTCCCACAACCTGTGCTCCAAAACAATGGTTTCCTTCCTCAACTTCCATGCATGCCTAATGTTCCATGGCCTTATACTTGGAACTCTCCAGTTCCACCACCTCATGGTTTGTGTCCTTTAGGATTTTCCTTTCCAATCTATCAACCGACGTTTTGGAACGTCCCATGGTTTCCCTCGCATTCCTATGCTTCTTCATCGATGTCTCCAAGCTCCGGTCCCAATTCTCCAACTTTGGGGAAGCATTCAAGGGACAGTGAACAAGACTCTTCTCACAAAGAACCATCGAAGCATAGAAATGGACGTGTTTTGGTTCCCAAAACTTTGAGAATTGATGACCCAAGCGAAGCTGCTAAGAGTTCTATATGGACAACTCTAGGAATTAAGAATGAATCAGCAAGTAGGGGAGGTATGTTTAAGGCCTTCCAATCAAAGAGGGGTGAAAGGAATGGCATTGAAACATCTTCTGTGTTGATGGCTAATCCTGCAGCATTATCTAGATCCCTTAATTTTCATGAAAACTTTTGA 1335 0.4277 MQETRDSTISLFGHKIPLSAGDRDGGEGYEGEQELHEEKYQTHEDPEAENVTERVQETYPPSNLEEAENSGNSSPEGITNLKTPSIEEEIAKSKDDKSEKEQSQEKTLKKPDKLLPCPRCNSMDTKFCYYNNYNVNQPRYFCRACQRYWTAGGATRNVPVGAGRRKNKNSASHYNHITISEALQEATIDSPNGTHIHSLKSNGRVISFGSDAPICDSMASVQNTGEKKVVDGTRNRFHGLEDQSLHGENGDEYSSVSNSMGESNKSTTSTFPQPVLQNNGFLPQLPCMPNVPWPYTWNSPVPPPHGLCPLGFSFPIYQPTFWNVPWFPSHSYASSSMSPSSGPNSPTLGKHSRDSEQDSSHKEPSKHRNGRVLVPKTLRIDDPSEAAKSSIWTTLGIKNESASRGGMFKAFQSKRGERNGIETSSVLMANPAALSRSLNFHENF 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00937 444 MobiDBLite consensus disorder prediction 239 276 - -
Car07g00937 444 Pfam Dof domain, zinc finger 113 169 IPR003851 GO:0003677|GO:0006355
Car07g00937 444 ProSiteProfiles Zinc finger Dof-type profile. 115 169 IPR003851 GO:0003677|GO:0006355
Car07g00937 444 MobiDBLite consensus disorder prediction 87 113 - -
Car07g00937 444 MobiDBLite consensus disorder prediction 351 370 - -
Car07g00937 444 MobiDBLite consensus disorder prediction 55 81 - -
Car07g00937 444 MobiDBLite consensus disorder prediction 333 373 - -
Car07g00937 444 MobiDBLite consensus disorder prediction 25 52 - -
Car07g00937 444 MobiDBLite consensus disorder prediction 333 350 - -
Car07g00937 444 MobiDBLite consensus disorder prediction 249 276 - -
Car07g00937 444 PANTHER CYCLIC DOF FACTOR 1 1 443 - -
Car07g00937 444 MobiDBLite consensus disorder prediction 1 113 - -
Car07g00937 444 PANTHER CYCLIC DOF FACTOR 2 1 443 IPR045174 GO:0003700|GO:0006355
Car07g00937 444 ProSitePatterns Zinc finger Dof-type signature. 117 153 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00937 Car-Chr7 8286664 8288715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00937 1 444 C2C2-Dof Transcription Factor Family AT3G47500 47.403 8.04e-115 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car07g00937 zf-Dof 2.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00937 - - gmx:778113 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01884 06 18821923 18825412 Car07g00937 07 8286664 8288715 ECH
Car07g00937 07 8286664 8288715 Car07g00937 07 8286664 8288715 ECH
Car02g00757 02 10481616 10483893 Car07g00937 07 8286664 8288715 PCT