Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00867 ATGCAGGAAATACATTCCATCGGAGGAGGAACCAAGTTCTTCGCTGCCGGAACCGCCGACCGGAGACTCAGACCTCACAACAACAACCACCACAACCACCAAGCCTTAAAATGTCCTCGTTGCGACTCCATCAACACAAAGTTCTGTTACTACAACAACTACAACCTCTCTCAGCCACGTCACTTCTGCAAAAACTGCCGTCGTTACTGGACCAAAGGCGGCGTCCTCCGTAACGTCCCCGTCGGCGGTGGTTGCCGTAAATCTAAACGCTCCAACAAACCAAAAAACTCTTCATCCTCTTCAGAAACCACTGCTTTGCCGGGAACTCCACCGGAGACAGAGAACAAGTCAAACTCCCACTCGAGCAGCGAGAGTTCTAGCCTCACCGCCGCGGCGGTGACGGAGGCGGTTTCAACACCGTCGGCTACGAACACTAACTCGAAAAAAACGCAAGAGTCGAAGTTGTTGAGCCATGTGAATCAATCAAACACTGATTTGGGGAATGATTCTCTGGAACAAGGAACAGGGGATTGTGGTATTTTCTCCGAGATTGCAAATTTTACAAGCTTAATCACTTCCTCAAACGAGGCATTACCGTTTGAATTCGGTAACGGGAACGGTAACGATTTTCAGTGGCAACATCAAAAGGTGATGACCGTTACCGGCAATCAACCAAATCATAACGAAGATGTTTTGAAGTTGTTACCGGGGAATATGGGTGCGGGTGCTTCGTTAATGGACGGTGTTGATTTCTCTGCGCTGCAAAATAAAACTAGCAACGGAGGATTTGGACCGTTGGATTGGCATGGTGATGGTGGCGCGGATCATGGTTTATTTGATCTTCCTAACACCGTTGATCAAGGTTACTGGGCTCACACTCATTGGTCTGATCAGGATCATTCTAATCTCTTTCATCTTCCCTGA 924 0.4827 MQEIHSIGGGTKFFAAGTADRRLRPHNNNHHNHQALKCPRCDSINTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNKPKNSSSSSETTALPGTPPETENKSNSHSSSESSSLTAAAVTEAVSTPSATNTNSKKTQESKLLSHVNQSNTDLGNDSLEQGTGDCGIFSEIANFTSLITSSNEALPFEFGNGNGNDFQWQHQKVMTVTGNQPNHNEDVLKLLPGNMGAGASLMDGVDFSALQNKTSNGGFGPLDWHGDGGADHGLFDLPNTVDQGYWAHTHWSDQDHSNLFHLP 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00867 307 PANTHER DOF ZINC FINGER PROTEIN DOF5.4 9 297 - -
Car07g00867 307 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 9 297 IPR045174 GO:0003700|GO:0006355
Car07g00867 307 ProSitePatterns Zinc finger Dof-type signature. 38 74 IPR003851 GO:0003677|GO:0006355
Car07g00867 307 ProSiteProfiles Zinc finger Dof-type profile. 36 90 IPR003851 GO:0003677|GO:0006355
Car07g00867 307 MobiDBLite consensus disorder prediction 80 156 - -
Car07g00867 307 Pfam Dof domain, zinc finger 34 90 IPR003851 GO:0003677|GO:0006355
Car07g00867 307 MobiDBLite consensus disorder prediction 94 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00867 Car-Chr7 7710720 7712767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00867 20 307 C2C2-Dof Transcription Factor Family AT5G60850 43.771 5.88e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car07g00867 zf-Dof 2.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00867 - - mtr:MTR_4g109980 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00867 07 7710720 7712767 Car07g00867 07 7710720 7712767 ECH
Car07g00867 07 7710720 7712767 Car01g01636 01 35340473 35341721 PCT