Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00855 ATGGCACAAGATACTGCTTCTGGTGCTGAATCGCCACAGCCGCGTCAAGGTCTATTACGAGATCAGGTTCAACTAGTTAAAAGAAAGGATTCTGATCGCTATGAGATTGTTCCAATCCAAGATCCTTTGTCGTTTGAGAAAGGATTTTTCATAGTTATTCGTGCATGCCAGTTGTTGGCTCAAAAAAACGATGGAATCATATTAGTAGGAGTTGCAGGTCCCTCTGGAGCTGGGAAAACTGTTTTCACTGATAAAGTCCTCAGTTTTATGCCAAGCATAGCTGTCATAACCATGGACAATTATAATGATTCTAGTCGAATCATAGACGGAAACTTTGATGACCCTCGATTGACGGATTATGATACCTTGCTAAAAAATATACATGGTCTTAAATCAGGGAAGCCTGTTCAGGTTCCAATATATGATTTCAAGTCTAGTTCTCGCATCGGATACAGGACTCTTGAAGTCCCTAGCTCCCGTATTGTAATCATTGAAGGCATCTATGCCTTAAGTGAAAAATTACGACCTTTGCTTGATCTTCGTGTTTCTGTCACTGGTGGAGTTCATTTTGACCTTGTCAAGCGTGTTTTGCGGGACATTCAACGAGCTGGTCAAGAGCCAGAAGAAATAATTCATCAAATCTCTGAAACGGTATATCCCATGTATAAAGCTTTTATAGAGCCAGATCTCCAAACAGCACATATAAAAATTATTAACAAGTTTAATCCATTCACTGGATTCCAGAATCCCACCTACATATTGAAGTCAGCAAAAACTGTGACAGTGGATCAAATCAAGGCAGTTATTTCTGCAGAGCATACTGAAACCGAAGAGGAAACATACGATATATATCTTCTACCCCCTGGAGAAGACCCTGAAGCATGTCAATCATATTTGAGGATGAGAAACCGGGATGGAAAGTACAATCTTATGTTTGAGGAATGGGTTACGGATAGTCCGTTCATTATATCACCTAGAATTACTTTTGAGGTCAGTGTGCGTCTGCTTGGAGGGCTGATGGCATTGGGGTATACAATTGCAGCAATCCTGAAAAGAAGCAGCCATGTATTTCACGATGATAAAGTGTCGATAAAAACTGATTGGCTAGAACAACTTAATCGCCTATATGTCCAGGTGCAAGGGAAAGATAGGAATTATGTTAAATTTGTAGCAGAGAAACTGGATTTGGATGGTTCCTATGTACCTCGCACTTACATTGAACAAATTCAGCTAGAAAAGCTTGTAAATGATGTGATGGCACTGCCGGATGATCTGAAGACAAAACTGAGCATAGATGATGATTCAGTTTCAAGCCCCAAAGAAGCACTTTCCAGAGCTTCAGCAGATAGGAGAATGAAGTATCTTAATCGAGGTATTTCACAGTCATATTCAAATCAAAGGGACAAGATTCTACCTAAGTTGACTAAACTTGCTATAAATAACAGAGGATTCGACGGGAGAGCTCTAGAATCACCTGCTCCGATTGCCAACCAAATAGAAATGTTGAAAGAATAG 1515 0.4007 MAQDTASGAESPQPRQGLLRDQVQLVKRKDSDRYEIVPIQDPLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTVFTDKVLSFMPSIAVITMDNYNDSSRIIDGNFDDPRLTDYDTLLKNIHGLKSGKPVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQNPTYILKSAKTVTVDQIKAVISAEHTETEEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRSSHVFHDDKVSIKTDWLEQLNRLYVQVQGKDRNYVKFVAEKLDLDGSYVPRTYIEQIQLEKLVNDVMALPDDLKTKLSIDDDSVSSPKEALSRASADRRMKYLNRGISQSYSNQRDKILPKLTKLAINNRGFDGRALESPAPIANQIEMLKE 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00855 504 SUPERFAMILY CYTH-like phosphatases 261 408 IPR033469 -
Car07g00855 504 Pfam Phosphoribulokinase / Uridine kinase family 69 237 IPR006083 GO:0005524|GO:0016301
Car07g00855 504 PRINTS Uridine kinase signature 133 148 - -
Car07g00855 504 PRINTS Uridine kinase signature 66 83 - -
Car07g00855 504 PRINTS Uridine kinase signature 189 199 - -
Car07g00855 504 PRINTS Uridine kinase signature 225 238 - -
Car07g00855 504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 237 IPR027417 -
Car07g00855 504 PANTHER INORGANIC PYROPHOSPHATASE TTM1 6 487 - -
Car07g00855 504 Gene3D - 67 249 IPR027417 -
Car07g00855 504 PANTHER URIDINE KINASE 6 487 - -
Car07g00855 504 Pfam CYTH domain 271 405 IPR023577 -
Car07g00855 504 ProSiteProfiles CYTH domain profile. 249 411 IPR023577 -
Car07g00855 504 CDD UMPK_like 68 240 - -
Car07g00855 504 Gene3D - 254 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00855 Car-Chr7 7559631 7566128 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00855 67 237 PRT Gene Family AT5G40870 28.333 1.07e-18 87.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00855 07 7559631 7566128 Car07g00855 07 7559631 7566128 ECH
Car06g01775 06 17617757 17634596 Car07g00855 07 7559631 7566128 PCT