Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03585 ATGGTTTTCTCTTCTATTCCAGGCTATATAGATCCTCCCAATTGGCACCAGCAACAAAACCATCATCTTCAAGGAAATGGAAGTGATAACAACACTCAACTCCTTCCACCTTTACCACCTCAAGTGGGAGGTAGTACTGGCGTTGGCGGTGGTAATATTATCGGCTCGATCAGACCAAATTCAATGGCAGATCGAGCTCGTTTAGCAAAATTACCACCGCCAGAGCCAGCGCTAAAGTGTCCACGATGTGACTCAACCAACACTAAGTTTTGCTACTTCAACAACTATAGTCTCACTCAACCTCGTCACTTTTGTAAGACATGTAGACGTTATTGGACAAGAGGGGGTGCACTTAGAAATGTTCCTGTTGGTGGAGGGTGTCGTAGAAACAACAAGAAAAACAAAAGAAGCCGTTCAAAATCACCTTCAACAGCTACAAACTCTGAGAAATTACAAACAACAAGTGCAAATATCCCTTCTTCTCATCATGAGATAATTGGTCAGTTACCACCACATCAAATTACAAATCTACCCTTCATGGCTTCTCTTCAGAATCTGAGTCGTTATACAGTTGGAAACATGAATCTTGGTAATTTGCAGCAACAACAAGAAACAGATCATATGGGGTTTCAAATTGGTTCTGTTTCTGCAGGTAATAATAATATTGGAGTTGAACAACAGTGGCGTAATTTGCAGCAATTTCCATTCTTGAATACTTTTGAATCATCAAATTCTGCTGGAAATAATTCATACCCTTTTCAAGGAGAAAGTAATATTGAAGCTTCAGCTTCTGTATTTGTTGGAGATACAGGATCGAATTCTAGGGTTAATAATAATACTCAACAACCACCAGTTAAAATGGAAGAAAATGGAGGTTTGAATTTGTCAAGAACTTCACTTGGTATCACTGAACATAACCAACAATACTTTTCATGGAATGATCTATCAGGTTCTTCAACTAATCATCATCTCTTGTAA 978 0.3875 MVFSSIPGYIDPPNWHQQQNHHLQGNGSDNNTQLLPPLPPQVGGSTGVGGGNIIGSIRPNSMADRARLAKLPPPEPALKCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNNKKNKRSRSKSPSTATNSEKLQTTSANIPSSHHEIIGQLPPHQITNLPFMASLQNLSRYTVGNMNLGNLQQQQETDHMGFQIGSVSAGNNNIGVEQQWRNLQQFPFLNTFESSNSAGNNSYPFQGESNIEASASVFVGDTGSNSRVNNNTQQPPVKMEENGGLNLSRTSLGITEHNQQYFSWNDLSGSSTNHHLL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03585 325 MobiDBLite consensus disorder prediction 271 292 - -
Car06g03585 325 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 5 322 - -
Car06g03585 325 Pfam Dof domain, zinc finger 77 132 IPR003851 GO:0003677|GO:0006355
Car06g03585 325 ProSiteProfiles Zinc finger Dof-type profile. 78 132 IPR003851 GO:0003677|GO:0006355
Car06g03585 325 MobiDBLite consensus disorder prediction 122 159 - -
Car06g03585 325 MobiDBLite consensus disorder prediction 140 159 - -
Car06g03585 325 ProSitePatterns Zinc finger Dof-type signature. 80 116 IPR003851 GO:0003677|GO:0006355
Car06g03585 325 MobiDBLite consensus disorder prediction 11 33 - -
Car06g03585 325 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 322 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03585 Car-Chr6 67116904 67118914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03585 17 312 C2C2-Dof Transcription Factor Family AT3G55370 41.768 1.10e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car06g03585 zf-Dof 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03585 - - gmx:100816635 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03585 06 67116904 67118914 Car06g03585 06 67116904 67118914 ECH
Car01g02575 01 51460056 51461382 Car06g03585 06 67116904 67118914 PCT