Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02701 ATGGTTTTTACTTCCATACCAACTGCTTATCTTGATGCAGCCAACTGGCAACAACAGCAACAAAATCATCAACAACATGGAAACGGCGGTTCCGTCTCTCAACAACTGCTTCAATCACCACCACCACCTCAGCCACCGTCTCAACCTAATGGAGGAAGTGCCGGCTCAATTAGGCCGGGATCCATGTCCGACAGAGCAAGGATGGCCAACATGCCTATGCCAGAGACGGCACTGAAATGTCCACGTTGCGAATCAACCAACACAAAATTTTGCTATTTCAACAACTATAGTCTCTCTCAGCCACGACACTTCTGCAAGACTTGCAGAAGGTACTGGACGAGAGGAGGTGCTCTAAGGAATGTCCCGGTCGGCGGAGGATTTCGAAGAAACAAAAGAAGCAAAGGAAGCAACGCCGGAAACTCCACAAAATCTCCGGCAAGCTCCGACCGCCAAACGGGTAGTGCTAGTTCAACAAACTCAATCAACTCCAACAACAATCACCCTTCTAATGATATATTAGGCCTTACACCACATATGGCTTCTTTAAGGTTCATGGCACCATTGCATCATAATATTAACAACCTCAATGATTTTGGAGGAGGAGATATAGGTTTAAACTATGGATTTAGTTACATGggaggaggaggaggaggaggaggTGACTTAGGAAGTGCTTTAGGTGGTGGAAATGTTGTTAACTCAATTTTATCTTCAAGTGGTTTGGAACAATGGAGGATGCCATTACAAATGACTCAACAACAACATCAATTTCCTAATTTTTTGGCTGGTTTAGAAGGTTCATCAAATGGTTTATACCCTTTTGAAGGAAATACTCAAAATCATCATGAATTAATAACTAGTGGATATTTGAGGCCAAAGGTAATTAACTCAACTTCAGGAATTATGACTCAACTAGCTTCTGTGAAAATGGAAGATAGTAATATTAATTTATCAAGACAATTTTTGGGAATCAGCAACAATAATATTAATGATAATCAAGGAAGTGAGCAATTTTGGAATAGTGCTATTGTTGCTAGTAATTCTTCAGCTACTTGGAGTGATCATGTTTCTGGATTTAGCTCTTCTTCTAATACTACTAGTAACCATATGTAG 1113 0.3953 MVFTSIPTAYLDAANWQQQQQNHQQHGNGGSVSQQLLQSPPPPQPPSQPNGGSAGSIRPGSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRSKGSNAGNSTKSPASSDRQTGSASSTNSINSNNNHPSNDILGLTPHMASLRFMAPLHHNINNLNDFGGGDIGLNYGFSYMGGGGGGGGDLGSALGGGNVVNSILSSSGLEQWRMPLQMTQQQHQFPNFLAGLEGSSNGLYPFEGNTQNHHELITSGYLRPKVINSTSGIMTQLASVKMEDSNINLSRQFLGISNNNINDNQGSEQFWNSAIVASNSSATWSDHVSGFSSSSNTTSNHM 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02701 370 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 364 IPR045174 GO:0003700|GO:0006355
Car06g02701 370 MobiDBLite consensus disorder prediction 16 37 - -
Car06g02701 370 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 12 364 - -
Car06g02701 370 MobiDBLite consensus disorder prediction 133 172 - -
Car06g02701 370 ProSiteProfiles Zinc finger Dof-type profile. 78 132 IPR003851 GO:0003677|GO:0006355
Car06g02701 370 ProSitePatterns Zinc finger Dof-type signature. 80 116 IPR003851 GO:0003677|GO:0006355
Car06g02701 370 MobiDBLite consensus disorder prediction 16 67 - -
Car06g02701 370 MobiDBLite consensus disorder prediction 119 172 - -
Car06g02701 370 Pfam Dof domain, zinc finger 77 132 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02701 Car-Chr6 35772313 35774043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02701 45 341 C2C2-Dof Transcription Factor Family AT3G55370 40.256 3.75e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car06g02701 zf-Dof 4.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02701 - - pvy:116110527 335.109