Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02153 ATGTACTTGAGGAGAATACAGTGCAGAGATCGAAGATGGGCTTTGCTGTTGCAGCCATCAAAATACTTCTTTAGGCCTAAATTCTCTGATCATCATTGCTTTCAGTCTTTGTCACCTAAGACCACCGTGAAAGAATATTCTTCACACGGCGGTATTTTCAGAAGACATCTTTTAGGTTCAGATTCATCTAAACATAGTTTTGCTGGTCTGAACAAAAGGCCTAGTTTTTCTCTTAGGAGTACTCAGATACAAGCTTTTAGTTCCGAAAGCGATGAAAGTAGTGCAAGTGAGAATAAACAAGTCCATGTTAATGATGGAGCTAATTTTGATAAGGGGAAGAATCAGCTAGAGAAGGCTGGGGAAGATGTTATTAAATTCAGCAATGCGCATGCACGTCTTGGAGAGCAGGATCAAGAGGAATGGCTTAACAATGAGAAGCTTGCTATAGAAAGTAAAAAGAAAGAATCACCATTTTTGACACGAAGAGATAAGTTTAAGAATGAGTTTCTAAGAAGAATTGTTCCATGGGAGAAAATAAACATTTCTTGGGACACATTTCCTTATCACATCAATGAGCATTCCAAAAATCTTCTGATGGAATGTGCTGCTTCCCATTTGCGACATAATAAGTTTACTAAGTCTTATGGCACTCACCTTGCATCTTCAAGTGGGAGAATATTGCTTCAGAGCATTCCCGGGACTGAGCTCTATCGCGAGAGATTAGTTAGAGCTCTTGCACAAGATTTACAAGTTCCACTGTTGGTGCTTGACAGCAGCATCCTTGCTCCTTATgatattgatgatgatcaatcatcagactatgaatctgatgatgataatgcagaatctggagaagagggtgatctagagtctgagaatgatgatgataatgatgctagtaatgaagaagaGTGGACAAGCAGTGCTGAAGCGAAGTCAGATGCAAGTGATAATGAAGATGCCCTAGCAACTGCTGAAGCAGCCCTTAAAAAAGTTAAAGCCGCTGTTAAGAAACTTGTCCCTTACAATGTTGAAGAATTTGAGAAGATGGTGACCGGAGGAGAAGAGAGTTCTGCATCTTCTAATTCTAATGATGCCAAGTCATCTGATAAAAGTGGATGTGAGCTCAGAAAAGGTGATCGTGTGAAGTACATTGGGCCTTCTGTACAAGTTACGGCTGATGATAGGATCGTACTGGGGAAGATACCGACATCTGATGGTCCAACTAATGCGTATACTATTATACATGGCAGGCCTTTAAGTAATGGTCAGAGAGGAGAGGTATATGAGGTTAATGGAGACCGAGTTGCTGTCATCTTGGATGTTAATGAAGAAAAGGCCAATGAAAGTGAGGTGGAAAACTCTAACAATGATCGTGCAAAACCACCAATTTATTGGATACATGTTAAGGACATTGAGAATGATCTTGATGCTCAGTCACAGGATTGCTACATAGCAGTGGAGGCTTTATGTGAGGTTTTGAATACCAAAAAGCCTCTTATAGTCTATTTTCCGGATAGTTCACAGTGGCTGCATAAATCAGTTCCTAAATCCAACCGAAATGAGTTTTTTCACAAGGTTGAGGAGATGTTTGACCGGTTATCTGGCCCCGTAGTATTGATTTGCGGGCAAAATAAAGTTCATTCAGGAACAAAAGAGAAAGAACAATTTACTATGATACTTCCAAACTTTGGACGTGTGGCTAAGCTGCCTCTTTCTTTGAAGCGGCTGACTGATGGGTTTAAGGGGGGAAAGACATCAGAAGatgatgaaattaacaagctcttctctaatgttttgtgtgtgcatccaccaaagGATGAGAATCTACAGACAGTATTCAAAAAACAACTCGAGGAAGATAGGAAAATTGTGATTTCACGTAGTAATTTGAATGAACTACGAAAGGTTCTTGAAGAATATCAGTTATCGTGCATGGATCTCTTGCAAGTGAATACTGAAGGAATCATTTTAACAAAGCAAAAAGCTGAAAAAGTTGTTGGCTGGGCAAAAAATCATTACTTGTCGTCATGCCTGCTTCCTTCTGTTAAAGGAGAAAGATTGTGCCTACCTCGCGAAAGTCTTGAAATTGCGATCTCAAGGATGAAAGGCATGGAAACTATGTCACGAAAACCGTCTCAGAACCTCAAGAGCCTTGCAAAGGATGAGTTTGAGAGCAATTTCATTTCAGCTGTTGTACCTCCTGGTGAAATTGGGGTGCAGTTTGATGACATAGGGGCTCTTGAAAATGTTAAGACAGCACTTCAGGAACTTGTTATTCTTCCAATGAGAAGGCCTGAGCTTTTCTCTCACGGAAACCTGTTGCGGCCCTGCAAAGGAATATTACTTTTTGGTCCTCCTGGCACTGGGAAAACTCTTCTGGCCAAGGCACTTGCAACAGAAGCCGGTGCAAATTTTATCAGCATTACCGGTTCTACCCTTACATCAAAGTGGTTTGGAGATGCTGAAAAACTAACCAAAGCGCTTTTCTCATTTGCCAGCAAGCTTGCACCTGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTGGTGCTCGAGGTGGTGCTTTTGAGCATGAGGCAACTAGAAGAATGAGGAACGAGTTCATGGCAGCGTGGGATGGATTGAGGTCAAAAGAAAATCAACGAATCCTCATTCTTGGTGCAACAAACCGGCCATTCGATCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATGTTGATTTACCAGATGCTGAAAATCGAAAGAAGATTCTAAGAATATTCCTTGCAAAAGAAAATCTCAATCCTGAATTTGAGTATGGGAAACTTGCTAACTTGACCGAAGGATACTCTGGCAGTGATTTGAAGAACCTATGTGTTGCTGCAGCATATAGACCTGTTCAAGAGCTCTTAGAAGAAGAAAAGAAGGGAGAAAAAGATGGTACAACTTCGGTATTAAGGCCTCTTAATTTGGATGATTTTGTGCAAGCAAAATCAAAGGTGGGTCCGTCTGTTGTGTATGATGCAACAAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTACGGTGAAGGCGGTAGTAGAACAAAAGCACCAATGGGATTCGGGGGCTGA 3105 0.3887 MYLRRIQCRDRRWALLLQPSKYFFRPKFSDHHCFQSLSPKTTVKEYSSHGGIFRRHLLGSDSSKHSFAGLNKRPSFSLRSTQIQAFSSESDESSASENKQVHVNDGANFDKGKNQLEKAGEDVIKFSNAHARLGEQDQEEWLNNEKLAIESKKKESPFLTRRDKFKNEFLRRIVPWEKINISWDTFPYHINEHSKNLLMECAASHLRHNKFTKSYGTHLASSSGRILLQSIPGTELYRERLVRALAQDLQVPLLVLDSSILAPYDIDDDQSSDYESDDDNAESGEEGDLESENDDDNDASNEEEWTSSAEAKSDASDNEDALATAEAALKKVKAAVKKLVPYNVEEFEKMVTGGEESSASSNSNDAKSSDKSGCELRKGDRVKYIGPSVQVTADDRIVLGKIPTSDGPTNAYTIIHGRPLSNGQRGEVYEVNGDRVAVILDVNEEKANESEVENSNNDRAKPPIYWIHVKDIENDLDAQSQDCYIAVEALCEVLNTKKPLIVYFPDSSQWLHKSVPKSNRNEFFHKVEEMFDRLSGPVVLICGQNKVHSGTKEKEQFTMILPNFGRVAKLPLSLKRLTDGFKGGKTSEDDEINKLFSNVLCVHPPKDENLQTVFKKQLEEDRKIVISRSNLNELRKVLEEYQLSCMDLLQVNTEGIILTKQKAEKVVGWAKNHYLSSCLLPSVKGERLCLPRESLEIAISRMKGMETMSRKPSQNLKSLAKDEFESNFISAVVPPGEIGVQFDDIGALENVKTALQELVILPMRRPELFSHGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRKKILRIFLAKENLNPEFEYGKLANLTEGYSGSDLKNLCVAAAYRPVQELLEEEKKGEKDGTTSVLRPLNLDDFVQAKSKVGPSVVYDATSMNELRKWNEMYGEGGSRTKAPMGFGG 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02153 1034 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 1032 - -
Car06g02153 1034 Pfam AAA+ lid domain 937 970 IPR041569 -
Car06g02153 1034 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1032 - -
Car06g02153 1034 SMART AAA_5 777 914 IPR003593 -
Car06g02153 1034 MobiDBLite consensus disorder prediction 87 112 - -
Car06g02153 1034 MobiDBLite consensus disorder prediction 268 303 - -
Car06g02153 1034 MobiDBLite consensus disorder prediction 352 375 - -
Car06g02153 1034 MobiDBLite consensus disorder prediction 87 103 - -
Car06g02153 1034 Gene3D - 740 1016 IPR027417 -
Car06g02153 1034 MobiDBLite consensus disorder prediction 266 319 - -
Car06g02153 1034 ProSitePatterns AAA-protein family signature. 884 903 IPR003960 GO:0005524|GO:0016887
Car06g02153 1034 CDD AAA 746 912 - -
Car06g02153 1034 Gene3D - 913 998 - -
Car06g02153 1034 MobiDBLite consensus disorder prediction 305 319 - -
Car06g02153 1034 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 740 962 IPR027417 -
Car06g02153 1034 Pfam ATPase family associated with various cellular activities (AAA) 781 911 IPR003959 GO:0005524|GO:0016887
Car06g02153 1034 MobiDBLite consensus disorder prediction 354 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02153 Car-Chr6 21935822 21951421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02153 706 972 Calmodulin-binding Proteins AT3G56690 36.101 2.57e-40 159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02153 06 21935822 21951421 Car06g02153 06 21935822 21951421 ECH