Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02148 ATGAAGAACATGAACATCTCTTTCTGCATGCTTCTCATGGCATTACTAGTTCGCTTAGGTGGAAGCATACCCTACAACTATGGTGATGCCCTTGACAAAAGCTTGATGTTCTTTGAAGCACAAAGGTCTGGTAAATTACCATTTCAACAACAGCGAATCAAATGGCGCGGTGATTCCGGTCTCAAGGATGGAATTCAGCAAGGAGTAGACTTGGTGGGAGGGTACTATGATGCAGGTGATAATGTGAAGTTTGGGCTGCCAATGGCTTACAGTGTCACAATGCTTGCATGGGGAGCTATTGAGTTTAGTAAGGAAATTACAGACTTAAACCAAATGGGACACACACTTTGGGCTATTAAATGGGGAACTGATTACTTCATCAAAGCACATACTCAGCCTAATGTTCTTTGGGGACAGGTGGGGGATGGAGCTTCTGATCACTACTGCTGGGAACGTGCTGAAGACATGACTACTTCAAGAACTGCTTACAAAATTGATGAACAACATCCTGGCTCTGATCTTGCAGGTGAAACTGCAGCTGCATTGGCTGCTGCATCCATAGCTTTCAGGCCATACAACTCTTCTTACTCTAACCTCCTGCTAGTTCACGCCAAACAACTCTTCACATTCGGTGATAGGTACAGAGGTCTATATGATGAATCCATAACTAGTGCTCGGCAATTCTACGATTCTTCTGGTTATTCAGATGAATTGTTATGGGCTGCTGCATGGTTGCATCGAGCAACCGGTGATGAATACTACCTAAAGTATACAGTGGACAATGCGGTGTATATGGGGGGAACTGGCTGGGCAGTGAAAGAGTTCTCTTGGGACAACAAATATGCTGGTGTGCAGACCCTCCTATCAAAGGTATTACTAGAAGGGAAAGCTGGTCCATACACCTCTACACTAAAGCAATATCAGGCCAAAGCAGATTATTTTTCATGTGCCTGTTTGCAAAAGAATGATGGTTACAATGTCCAGAAAACTCCAGGTGGCTTATTATACGTGCGTGAATGGAACAACATGCAGTATGTTTCCTCAGCTACATTTCTTTCAGCTGTTTACTCTAATTATCTGTCAGCTGCAAAATCACAGCTCAACTGTCCTGACGGTCAAATTCAGCCTCAGGACCTCCTCAATTTTGCCAAGTCCCAGGCTGATTATATCCTTGGTAAAAACCCGAAGGATACGAGCTACTTGGTTGGATATGGACCGAAGTATCCTATTCATGTTCATCACAGAGGTGCTTCAATTGCTTCAATCTCTGTTGTCCGCTCTCAGGTTGGTTGCACACAAGGATTTGACGCATGGTATAACCGTCCGGAGCCAAATCCAAATGTCATCTATGGAGGCCTTGTGGGGGGTCCAGATAAAAATGATGGCTTCTCTGATGACAGATCCAATTATGAAGAAACTGAGCCTACACTTTCAGGATCTGCTCCCCTTGTAGGCATCTTTGCTAAACTGCAAAGTTCATATGGTAATATAGGTTCCTACCATCAGGAATCACCACTGCCCCATCAAAATACACCAAGTACAAGTACAACAGGCCTTTGGAAAGAGCCAGCACCTAAAACTAAAACACCAGAAGGTGCCCCAGTTGAATTCCTTCACTCAATCTCCAGCTCATGGACTGTTGGTGATACAACATATTACCGACACAAAGTGATAATCAAGAACACTTCTATAAAGCCAATATCAGATCTTAAGTTGGTGATTGAAAATCTCTCAGGCTCTGTATGGGGATTGTCTCCAACTGGAGAGAAGAACATCTATGAACTTCCTCAGTGGCTCAAGGTCTTGAATCCTGGTTCTGAATGTATCTTTGTTTATGTTCAAGGTGGACCTCAAGCAAAAATCTTGATTCAAAGCTTCCACTAA 1884 0.4352 MKNMNISFCMLLMALLVRLGGSIPYNYGDALDKSLMFFEAQRSGKLPFQQQRIKWRGDSGLKDGIQQGVDLVGGYYDAGDNVKFGLPMAYSVTMLAWGAIEFSKEITDLNQMGHTLWAIKWGTDYFIKAHTQPNVLWGQVGDGASDHYCWERAEDMTTSRTAYKIDEQHPGSDLAGETAAALAAASIAFRPYNSSYSNLLLVHAKQLFTFGDRYRGLYDESITSARQFYDSSGYSDELLWAAAWLHRATGDEYYLKYTVDNAVYMGGTGWAVKEFSWDNKYAGVQTLLSKVLLEGKAGPYTSTLKQYQAKADYFSCACLQKNDGYNVQKTPGGLLYVREWNNMQYVSSATFLSAVYSNYLSAAKSQLNCPDGQIQPQDLLNFAKSQADYILGKNPKDTSYLVGYGPKYPIHVHHRGASIASISVVRSQVGCTQGFDAWYNRPEPNPNVIYGGLVGGPDKNDGFSDDRSNYEETEPTLSGSAPLVGIFAKLQSSYGNIGSYHQESPLPHQNTPSTSTTGLWKEPAPKTKTPEGAPVEFLHSISSSWTVGDTTYYRHKVIIKNTSIKPISDLKLVIENLSGSVWGLSPTGEKNIYELPQWLKVLNPGSECIFVYVQGGPQAKILIQSFH 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02148 627 MobiDBLite consensus disorder prediction 456 477 - -
Car06g02148 627 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 389 415 IPR018221 -
Car06g02148 627 SMART CBM49_2 535 615 IPR019028 GO:0030246
Car06g02148 627 MobiDBLite consensus disorder prediction 502 522 - -
Car06g02148 627 PANTHER ENDOGLUCANASE 5 20 582 - -
Car06g02148 627 MobiDBLite consensus disorder prediction 502 532 - -
Car06g02148 627 Pfam Carbohydrate binding domain CBM49 536 614 IPR019028 GO:0030246
Car06g02148 627 SUPERFAMILY Six-hairpin glycosidases 25 496 IPR008928 GO:0005975
Car06g02148 627 Pfam Glycosyl hydrolase family 9 27 486 IPR001701 GO:0004553|GO:0005975
Car06g02148 627 Gene3D - 23 494 IPR012341 GO:0005975
Car06g02148 627 PANTHER ENDO-1,4-BETA-GLUCANASE 20 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02148 Car-Chr6 21903538 21907739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02148 25 627 Glycoside Hydrolase AT1G48930 69.917 0.0 837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02148 06 21903538 21907739 Car06g02148 06 21903538 21907739 ECH