Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02142 ATGAGAGGTCTCTTCCGAACTACGAGATCAATCGTGTCCAATTTATTGTTCAATGGAACCAGCACCACCGTTGCACCGCGCAGAACAAATCGATCATACAGTCTGATCCCGATGGTCATAGAGAATTCTTCTAGAGGTGAGAGAGCATATGATATCTTCTCTCGTCTTCTCAAAGAACGAATCGTTTGCATCAATGGACCTATCTCCGATGACACTGCACATGTCGTTGTTGCTCAGCTTCTATTTCTTGAATCTGAAAATCCTTCTAAGCCCATTCATATGTATCTCAATTCCCCTGGCGGGTCGGTAAGCGCAGGGCTTGCTATTTACGACACTATGCAGTACATTCGGTCTCCGATCAATACCATCTGTTTAGGTCAGGCTGCATCCATGGCTTCTCTGCTCTTGAGTGCGGGTGCCAAGGGTCAGAGGCGTTCTCTTCCAAATGCTACAATCATGGTTCACCAGCCTTCTGGTGGAACCGGTACTTCCCAGGCAAAGGATATTTTGATTTATGCCAAGCAGATTGGTCGAATGTGGGATCAGTTGAATGAATTGTACGTCAAGCATACGGGCCAACCACTTGATGTTATTCAAAAATATATAGACAGGGATTATTTCATGACAGCTCAAGAGGCGAAGGAGTTTGGAATTATTGATGAGGATTGGAGGGTTTTAGTGGGGGAAGCTAAAAAGGTGGAGGATTGGAAGATTTTCTTAAAAGCAAAAGTAAAGGAAGGAGTAACAACTTCTAGTCCACCAATTCCTTTTTCACCACCAAGGACAAGAAAGGATCCTAGCGTTGTTCATGCCTTGCTCGCAATTGTTTCTAGTGATCCCGAACTTTTGCCATTGGAACACAATGCCAAAAGTTGGGCATTTATTTTGAGAATATGCAGAGGTCCCATCCCTAACCACCCTCTTTCTGGgcaaacgcaaacgcaaacgcaaacgcaaaacgcaaacCCAATAAGCCATTCTCACAAAAAATCTTCTTATGTTCTCTCCCCAATTCCCCCAATCCCTCTATCCTCCGCCGCTGAATCCTTCTCAATATCCCCGCGGCGCCTCCGCGGGATTTTCCTAGGGTTTTCCGATCGTTCCATTCCCTTTCAGCTGTTCTCCCACGACGTCGTTCTCCTAGTCATGCCTCCCGCGCGTCGACGCGGAGCGAACAAGGCCAAGGCGAACGGACACTTGCGTTTAGGCGATCTTGTCCTCGCTAAGGTCAAGGGCTTCCCTGCTTGGCCTGCCAAGATAAGTAACCCTGAAGATTGGGAGAAAGCCCCTGATCCAAAGAAATATTTTGTTCAATTTTTTGGCACCAAAGAGATAGCTTTTGTTGCAGCCCCAGATATTCAGGTATTTACAAGTGAGTATAAAAATAAGTTGTCTTCTCGGCTTCAAGGCAAGACAAAATACTTTGCCCAAGCTGTGAAGGAAATATGTGCAGCTTTTGATGAGAATGAGAAACAAAAGGCTAGTGGTGACGACACAGATGATTCTCGAATTGGTTCAGAAGCTCCTCCTGTTGATGAGGCAGTGGGTAATCCAAAGGATACCTTTGATGCTGTGACGTCAAGTGAAGAAAAGGATAACATCCATGTGAGTAATATTGGTTCCAATTTGGAGAACTGTAAGCAGAAAACCAGAGAGAGGGGTAGCCTAGATGAAAAGCTCACTGAATCAGGCCGTCCAAATGAAAGTTCTTCTGTTTCATCACCTTTGGTCAAAGGTAAATTATCCACTGGTTCAGAGATAAAGAAGAATTCTAGCAAATCTACTCTTAAAGGTGCAAGTAATGTTCATGATTTTGGTCAACATGATAATGGAAATAGCGTTTTAACAAATGGGAGTAAGCCAAGGAAGCTTATTACTGGCTCAAAGAGAAGAAGTGAAGCTACAGATGATATAAATAAAATTGGTGGATCATCTACTGGAACACTTTTGAAGGTGGGAAGTTCTACTGGAAGTGTTGATCTTTCAAGGTCTGGGGAGACATTTAATAAAACTGGAAGGAAAGGTAAAGATGCACCTGCTGTTAAAACAGATTCTCCAGACACTCTTAAACCAGACTTGAATGGTAATACTGGAGAAAAAAACAAGAACTTGATTTCAAAAAAAGCAAGTCTTGAGGTAAAAAATGAATTACAAGAGATCATGTTGAATGCTGAGGAGGCTGATGGCAAAAATTCAGTTATGGGAAAGAAGAACCAAGTACATGCAAAGCATAATGTGGGGGCAAATGAATCCTTCCATGCTACAAAGAAGTTGAAACGCATGGATGCTAAAGATGATTTAACTTCAGGCCACATCCAAAAAGATGTGAAAAGGTCCACATCAAATTCGAAAACAGAAAAAAGCTTGCCATCAAGGGGTCAAATTTGTGTTGTAGGTTCTGATGACTCTGTCCGCGAGTTGCTACCTATGACCAAACAACATAGCCAAGTTCAGAAAACTATGCCTGATTCTGATAGAATTGCTCCTGATGAAAAAAAAGAATGGAGTATTCTTAAACCGAAAGATGATACGAAGAATGCTACAGCAAAACAAGTACAGAAGAAACGTAGAGCTGTTTGCCTTTATGAAGATGATGATGATGTACCTAAAACTCCTGTTCATGGAGGAGCTGCAAAAAATACGAAGTCACCTTTTGCTTCAGAGGTCAAGAAGGGCAATAATGCACATTCTGAGAAATCTGATGCTGCTCAGCTGACTCACATAAATTCTAGTGAACTTGAGGATACTCTTTTGAAAGATTCACCTTCTCTATTTCATAATGATCCATCCTCAATGAAACTGCCTGAAAAAGAGAAAGCTGATGAAGTCATTCCGGTGCATGTTCCTCATAGTAATGATAAGTTAGATTTAAAGCAGTTTCCCTCTAAGGTGGCAAAAGTAAGCTCTGCCTCCCCAGTAAAATCACCTCAGCCAGTTCCTGCGACAACAAAGTCTAATGCTGAGCGGAGTAAATCTTCCAAACCTTTGCTTAAAGCTTCCAGCAATGCTACTATTCACAAGAAGGCTGATAATGGGTCTTCCAAATCATTACATAACCTCAACTCTTCTCAGAACCAAGTTTCCGCCCATAAGAAGAAGCTGACATCTTCAGCTGAAATTTCTAAGAATACTACAAAGACATTGCCTCAAGCAGCTGAAGTTGCTGTTTCAGTAGTAGGTTCTAAGGAGCCTGATGCACTACATGTTGATAGGTACATATGCTTTTTACTCCTCTCATTTTGTTTGGTGTTATATGCTGATCCTTTTCCCTTCTTATTTTGTTTATATTGTTATAGATTGGAAGAGGGTGTGGAAGAAAGAAGTAATTTATATACTGGTTCAGGGACTCCAGAAACAGCTAAAACTATGAAGCATCTTATTGCTGCTGCCCAGGCAAAATGGAAACAATCTCATTCCCAATATCTTCTTTCTGGTATTCACAATGTTCAGGGGGGGACTCCTAGCCCTTCCACTGTTCAGCCATTTCTGTCTGTCTCAAGTAACATCATACAGACAGATGTGCAGGGAGTTTATGAGCACGCAACATCGGCTTCCCCTCCAACTAATGAATACCACTCTGCATCTCAAAATCAGCTTGATGCTGATGAAATTGAGGAGAGAAGAACGGGTTCTGTGCAAAGGGGTCCTGGAGGCTCACTCAGTGGTGGTACAGAGGCTGCTGTTGCTCGTGACGCATTTGAAGGAATGATCGAAACTTTGTCGAGGACCAAGGAAAGTATTGGGCGCGCAACTCGTCTTGCCATAGATTGTGCTAAGTACGGCATTGCCAACGAGGTTGTTGAACTTCTCATCAGGAAGTTGGAAAATGAAACTAGTTTTCATCGCAAAGTGGATTTGTTTTTTCTTGTTGATTCTATCACCCAGTGCTCACATAATCAAAAAGGTATTGCTGGAGCTTCTTACATCCCTACAGTTCAAGCAGCACTGCCACGTCTTCTTGGTGCTGCTGCTCCCCCTGGAGCTAGTGCCCGTGAAAATCGTCGTCAATGTCACAAGGTTTTGAGGCTGTGGCTTGAGAGGAAAATTTTGCCTGAGTCCATTATTCGCCGTTACATGGATGAAATTGGGGTTTCGAATGATGATATCACTGTTAGCTTTAACTTCCGGCGTCCATCTCGTGCTGAGCGATCCGTGGACGACCCAATTAGAGAAATGGAAGGCATGCTTGTTGATGAGTATGGAAG 4205 0.424 MRGLFRTTRSIVSNLLFNGTSTTVAPRRTNRSYSLIPMVIENSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGSVSAGLAIYDTMQYIRSPINTICLGQAASMASLLLSAGAKGQRRSLPNATIMVHQPSGGTGTSQAKDILIYAKQIGRMWDQLNELYVKHTGQPLDVIQKYIDRDYFMTAQEAKEFGIIDEDWRVLVGEAKKVEDWKIFLKAKVKEGVTTSSPPIPFSPPRTRKDPSVVHALLAIVSSDPELLPLEHNAKSWAFILRICRGPIPNHPLSGQTQTQTQTQNANPISHSHKKSSYVLSPIPPIPLSSAAESFSISPRRLRGIFLGFSDRSIPFQLFSHDVVLLVMPPARRRGANKAKANGHLRLGDLVLAKVKGFPAWPAKISNPEDWEKAPDPKKYFVQFFGTKEIAFVAAPDIQVFTSEYKNKLSSRLQGKTKYFAQAVKEICAAFDENEKQKASGDDTDDSRIGSEAPPVDEAVGNPKDTFDAVTSSEEKDNIHVSNIGSNLENCKQKTRERGSLDEKLTESGRPNESSSVSSPLVKGKLSTGSEIKKNSSKSTLKGASNVHDFGQHDNGNSVLTNGSKPRKLITGSKRRSEATDDINKIGGSSTGTLLKVGSSTGSVDLSRSGETFNKTGRKGKDAPAVKTDSPDTLKPDLNGNTGEKNKNLISKKASLEVKNELQEIMLNAEEADGKNSVMGKKNQVHAKHNVGANESFHATKKLKRMDAKDDLTSGHIQKDVKRSTSNSKTEKSLPSRGQICVVGSDDSVRELLPMTKQHSQVQKTMPDSDRIAPDEKKEWSILKPKDDTKNATAKQVQKKRRAVCLYEDDDDVPKTPVHGGAAKNTKSPFASEVKKGNNAHSEKSDAAQLTHINSSELEDTLLKDSPSLFHNDPSSMKLPEKEKADEVIPVHVPHSNDKLDLKQFPSKVAKVSSASPVKSPQPVPATTKSNAERSKSSKPLLKASSNATIHKKADNGSSKSLHNLNSSQNQVSAHKKKLTSSAEISKNTTKTLPQAAEVAVSVVGSKEPDALHVDRYICFLLLSFCLVLYADPFPFLFCLYCYRLEEGVEERSNLYTGSGTPETAKTMKHLIAAAQAKWKQSHSQYLLSGIHNVQGGTPSPSTVQPFLSVSSNIIQTDVQGVYEHATSASPPTNEYHSASQNQLDADEIEERRTGSVQRGPGGSLSGGTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLENETSFHRKVDLFFLVDSITQCSHNQKGIAGASYIPTVQAALPRLLGAAAPPGASARENRRQCHKVLRLWLERKILPESIIRRYMDEIGVSNDDITVSFNFRRPSRAERSVDDPIREMEGMLVDEYG 1401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02142 1401 MobiDBLite consensus disorder prediction 753 782 - -
Car06g02142 1401 MobiDBLite consensus disorder prediction 742 796 - -
Car06g02142 1401 MobiDBLite consensus disorder prediction 667 683 - -
Car06g02142 1401 CDD HDGF_related 400 485 IPR035496 -
Car06g02142 1401 SUPERFAMILY ClpP/crotonase 44 221 IPR029045 -
Car06g02142 1401 MobiDBLite consensus disorder prediction 689 703 - -
Car06g02142 1401 Hamap ATP-dependent Clp protease proteolytic subunit [clpP]. 35 226 IPR001907 GO:0004176|GO:0004252|GO:0006508
Car06g02142 1401 Pfam CID domain 1232 1356 IPR006569 -
Car06g02142 1401 SMART 558neu5 1232 1363 IPR006569 -
Car06g02142 1401 CDD S14_ClpP_2 51 221 IPR001907 GO:0004176|GO:0004252|GO:0006508
Car06g02142 1401 Gene3D - 392 497 - -
Car06g02142 1401 Pfam Clp protease 45 221 IPR023562 -
Car06g02142 1401 MobiDBLite consensus disorder prediction 489 703 - -
Car06g02142 1401 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1099 1401 - -
Car06g02142 1401 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 383 1071 - -
Car06g02142 1401 ProSitePatterns Endopeptidase Clp histidine active site. 144 157 IPR033135 -
Car06g02142 1401 MobiDBLite consensus disorder prediction 638 666 - -
Car06g02142 1401 MobiDBLite consensus disorder prediction 863 905 - -
Car06g02142 1401 MobiDBLite consensus disorder prediction 810 851 - -
Car06g02142 1401 ProSitePatterns Endopeptidase Clp serine active site. 122 133 IPR018215 -
Car06g02142 1401 MobiDBLite consensus disorder prediction 531 545 - -
Car06g02142 1401 MobiDBLite consensus disorder prediction 489 507 - -
Car06g02142 1401 PANTHER PROTEIN HUA2-LIKE 1 1099 1401 - -
Car06g02142 1401 PANTHER PROTEIN HUA2-LIKE 1 383 1071 - -
Car06g02142 1401 Pfam PWWP domain 403 486 IPR000313 -
Car06g02142 1401 MobiDBLite consensus disorder prediction 1205 1224 - -
Car06g02142 1401 MobiDBLite consensus disorder prediction 824 851 - -
Car06g02142 1401 SUPERFAMILY Tudor/PWWP/MBT 397 494 - -
Car06g02142 1401 MobiDBLite consensus disorder prediction 565 623 - -
Car06g02142 1401 MobiDBLite consensus disorder prediction 967 1042 - -
Car06g02142 1401 PRINTS Clp protease catalytic subunit P signature 122 139 IPR001907 GO:0004176|GO:0004252|GO:0006508
Car06g02142 1401 PRINTS Clp protease catalytic subunit P signature 91 111 IPR001907 GO:0004176|GO:0004252|GO:0006508
Car06g02142 1401 PRINTS Clp protease catalytic subunit P signature 51 66 IPR001907 GO:0004176|GO:0004252|GO:0006508
Car06g02142 1401 PRINTS Clp protease catalytic subunit P signature 201 220 IPR001907 GO:0004176|GO:0004252|GO:0006508
Car06g02142 1401 PRINTS Clp protease catalytic subunit P signature 143 162 IPR001907 GO:0004176|GO:0004252|GO:0006508
Car06g02142 1401 ProSiteProfiles CID domain profile. 1225 1366 IPR006569 -
Car06g02142 1401 ProSiteProfiles PWWP domain profile. 402 459 IPR000313 -
Car06g02142 1401 Gene3D - 1224 1368 IPR008942 -
Car06g02142 1401 SMART PWWP_4 400 457 IPR000313 -
Car06g02142 1401 MobiDBLite consensus disorder prediction 546 564 - -
Car06g02142 1401 Gene3D - 25 223 - -
Car06g02142 1401 MobiDBLite consensus disorder prediction 919 939 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02142 Car-Chr6 21844308 21856152 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02142 06 21844308 21856152 Car06g02142 06 21844308 21856152 ECH