Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01853 ATGCAACATATGAATTTTATGAGAGGATTAATGTTAAGCAAGCTTATTATATGTCTATGGAGTATCTACAGGTTCATATTGGGTTCCTTTATGAAACACGGGTCATTTTCATTGCAAATGATTATTAATTTTCATTACCACCTTTTTTCCAAATTGTGCATGAAGGGTAGGGCATTGTTAAATGCAATTGGGAATTTACGACTCTCAGGTCCTTATGCTGAGGCTCTCATAAATCTGGGTTACAATTTAGAGGATGTGGCTAATCAGGAGCCAGATGCAGCCCTTGGGAATGGAGGATTAGGTCGGCTTGCTTCTTGCTTTTTAGACTCTTTGGCAACGCTGAATTACCCTGCATGGGGATATGGACTTAGATACAAGTATGGTTTATTTAAACAGCGTATAACAAAAGACGGTCAAGAGGAAGTTGCTGAAAACTGGCTTGAGATGGGAAATCCCTGGGAAGTTCAGAGAAACGATGTCACTTATCCAGTTAAATTCTATGGAAAAGTTATTTCAGGACCAAATGGAAGTAAACAGTGGACTGGAGGAGAAAATATATTGGCTGTTGCTTATGATGTTCCAATACCTGGATACAAAACTAGAACCACCATAAACTTGCGATTGTGGTCTACTAAAGTTTCAACTGAAGAATTTGATTTGCATGCTTTCAATACTGGGGATCATGCCAAAGCATACGCCGCCATGAAGAATGCAGAGAAGATCTGTTACATTCTATACCCTGGGGATGAATCAATAGAGGGAAAGACTCTAAGACTAAAGCAACAATATACATTATGCTCAGCCTCTCTGCAGGATATTATTGCGCGCTTTGAAAAGAGATCAGGAAAGACAGTTAATTGGGACACCCTCCCAGATAAAGTGGTGGTGCAAATGAATGATACTCACCCAACACTCTGCATTCCTGAGCTGATTAGGATATTAACAGATGTGAAGGGTTTAAGCTGGGAGAAAGCTTGGGATATTACTAAAAGAGCGGTTGCTTACACAAACCACACAGTTCTACCAGAGGCACTAGAGAAGTGGAGTTTAGCGCTTCTGCAGGATTTGCTTCCTCGACACGTCGAAATTATCAGAAAGATCGATGAGGAGTTTATACATGAAATTATTTCTGAGTATGGAACAGATGATCTTAACTTGCTGCAAGAAAAGCTTAGAAAGATGAGAATACTAGAAAATTTCGAGTTGCCTGATTCAGTGGTTGAGCTGCTTAATAATACTAGAAAAGCTGTTGATCCTGTTGAGGACATTGATGTTAATGATAATGATAATGATATAAAGGCATCAGACaagaaagatgatgaagaagaagaagatgatgaaaaagaagtgacggaagaggaacaagaCGGCGATGATGGTAAAGATGCTGTTGTAGAGAACAAAATAGAAAAGACATTCGAAGTTGATCCAAAACTGCCAATGATGGTTCGCATGGCTAACCTATGTGTTGTTGGTGGATTTTCTGTGAATGGAGTGGCTGAGATTCACAGTGAGATTGTAAAAGAGGAAGTTTTTAATGAATTTTACAAGTTTTGGCCTAAGAAGTTCAGCAATAAAACAAATGGAGTGACACCTAGAAGATGGATTCGTTTCTGTAATCCCGATCTGAGTAAAATCATAACCAAATGGATTGGAACAGAAGACTGGGTAACAGATCTTGAGAAATTGGCTATACTTCGCAAGTTTGCAGATAATGATGATCTACAATTAGAGTGGATGGAAGCAAAAAGAAGAAACAAGATTAAGGTTGCATCATTTATCAAAGAGAAAACCGGCTATGTTGTCAGTCCAAATGCAATGTTTGATGTACAGGTGAAACGTATCCATGAATACAAGCGGCAGTTACTGAATATCATGGGAATTGTTTATCGCTACAAACAAATCAAACAATTGAGTGCTGAGGAAAGAAAACAAATGTTTGTTCCTCGGGTTTGTATTTTTGGTGGGAAAGCATTTGCGACATATGTTCAAGCCAAGAGGATTGTAAAGTTCATCACAGATGTAGGAGCTACAGTTAATCATGATCCAGAGATTGGAGATCTTTTGAAGGTTGTATTTGTTCCTGATTACAATGTCAGTGTTGCTAAAATGCTAATTCCTGGAAGTGAGTTGTCCCAGCACATCAGCACAGCTGGTATGGAGGCCAGTGGAACAAGCAACATGAAATTTGCAATGAATGGATGTGTACAAATTGGAACTCTTGATGGGGCTAACGTTGAAATAAGAGAAGAAGTTGGAGAAGAAAACTTCTTTCTTTTTGGTGCACGGGCTCAAGAAATTGCAGGGCTAAGGAAAGAAAGAGCAGAGGGAAAGTTTGTACCAGACCCATGGTTTGAAGAAGTGAAGGCATATGTTAGAAGTGGTGTTTTTGGCACCTACAACTATGACGAGTTGATGGGATCTTTAGAAGGGAATGAAGGCTATGGTCGTGCTGATTATTTCCTTGTTGGCAAGGACTTCCCTAGCTACTTGAAGTGTCAAGAAGAAGTTGATAAGGCATATCGTGATAAAAAAAAATGGACAAGAATGTCAATCTTGAACACTGCCGGTTCGTATAAATTCAGCAGTGACAGGACTATTCATGAATATGCTAGAGATATATGGAGAATTGAGCCAGTTGTATTATCTTGA 2652 0.3827 MQHMNFMRGLMLSKLIICLWSIYRFILGSFMKHGSFSLQMIINFHYHLFSKLCMKGRALLNAIGNLRLSGPYAEALINLGYNLEDVANQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAENWLEMGNPWEVQRNDVTYPVKFYGKVISGPNGSKQWTGGENILAVAYDVPIPGYKTRTTINLRLWSTKVSTEEFDLHAFNTGDHAKAYAAMKNAEKICYILYPGDESIEGKTLRLKQQYTLCSASLQDIIARFEKRSGKTVNWDTLPDKVVVQMNDTHPTLCIPELIRILTDVKGLSWEKAWDITKRAVAYTNHTVLPEALEKWSLALLQDLLPRHVEIIRKIDEEFIHEIISEYGTDDLNLLQEKLRKMRILENFELPDSVVELLNNTRKAVDPVEDIDVNDNDNDIKASDKKDDEEEEDDEKEVTEEEQDGDDGKDAVVENKIEKTFEVDPKLPMMVRMANLCVVGGFSVNGVAEIHSEIVKEEVFNEFYKFWPKKFSNKTNGVTPRRWIRFCNPDLSKIITKWIGTEDWVTDLEKLAILRKFADNDDLQLEWMEAKRRNKIKVASFIKEKTGYVVSPNAMFDVQVKRIHEYKRQLLNIMGIVYRYKQIKQLSAEERKQMFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVVFVPDYNVSVAKMLIPGSELSQHISTAGMEASGTSNMKFAMNGCVQIGTLDGANVEIREEVGEENFFLFGARAQEIAGLRKERAEGKFVPDPWFEEVKAYVRSGVFGTYNYDELMGSLEGNEGYGRADYFLVGKDFPSYLKCQEEVDKAYRDKKKWTRMSILNTAGSYKFSSDRTIHEYARDIWRIEPVVLS 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01853 883 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 475 880 - -
Car06g01853 883 CDD GT35_Glycogen_Phosphorylase 56 877 - -
Car06g01853 883 Gene3D Glycogen Phosphorylase B; 533 862 - -
Car06g01853 883 MobiDBLite consensus disorder prediction 420 437 - -
Car06g01853 883 TIGRFAM P_ylase: glycogen/starch/alpha-glucan phosphorylases 466 877 IPR011833 GO:0004645|GO:0005975|GO:0030170
Car06g01853 883 PIRSF Glucan_phosphorylase_GlgP 45 883 IPR000811 GO:0005975|GO:0008184
Car06g01853 883 PANTHER GLYCOGEN PHOSPHORYLASE 40 882 IPR000811 GO:0005975|GO:0008184
Car06g01853 883 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 721 733 IPR035090 -
Car06g01853 883 MobiDBLite consensus disorder prediction 438 460 - -
Car06g01853 883 MobiDBLite consensus disorder prediction 420 463 - -
Car06g01853 883 Pfam Carbohydrate phosphorylase 78 399 IPR000811 GO:0005975|GO:0008184
Car06g01853 883 Pfam Carbohydrate phosphorylase 466 877 IPR000811 GO:0005975|GO:0008184
Car06g01853 883 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 49 396 - -
Car06g01853 883 Gene3D Glycogen Phosphorylase B; 45 532 - -
Car06g01853 883 PANTHER ALPHA-1,4 GLUCAN PHOSPHORYLASE L-2 ISOZYME, CHLOROPLASTIC/AMYLOPLASTIC 40 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01853 Car-Chr6 18409373 18416350 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01853 06 18409373 18416350 Car06g01853 06 18409373 18416350 ECH