Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01786 ATGGCTGCTTCAACTTCTTCTCCAAACATCTCAACATCTTTGCGGAGAAAGACAAGGAAAACAAACTATCCTTCATTGCTAGGAAAAAATATATCTTTGCACACTAAACTTGGTTTCTCATCTTCTGTGCCATTCAATAAATCTTTAAATGTGAAATCCTATGGCGCTGCAAAGTATGATGAAGTGGTGGATGAAGAATTGGACAAGATTAGAAGGCTTCAGAATGGTTCAGATGTTAGAGGAGTGGCATTGGAAGGTGAGAAAGGAAGAACAGTTGACCTCACTCCACCAGCTGTGGAGGCTATATCAGAGAGTTTTGGGGAGTGGGTTATCAATGGTTTAGAGAAGGAAAAAGGATATCCTGTAGAGAATGTGAGCGTGTCTCTCGGACGAGACCCTCGAATTTCAGCGTCAAAATTGAGCGTTGCAGTGTTTGCAGGTCTTGCTCGTGCTGGTTGTATGACGTTTGATGTGGGACTAGCCACTACACCAGCTTGTTTCATGAGCACATTGTTGCCTCCATTTGTCTATGATGCTTCAATAATGATGACAGCATCTCATTTGCCTTACACACGTAATGGTCTGAAATTTTTCACAAAGAGAGGGGGGCTTACTTCATTGGAAGTAGAAGAAGTATGTGACAAAGCTGCTCGTAAATATGCAAACAGGATGGCCAAAGTGTCTACCTTGCTAAACGTTCTTCCAACAAAAGTTGATTTCATGAGTGCTTATTCAAAGCACTTAAGAGAAATCATCAAGGAGAGAATAGGTCATCCTTTGCATTATGAAACTCCACTCAAGGGATTCCAGATAATAGTGAATGCTGGAAATGGCTCAGGAGGATTCTTCACATGGAATGTCTTAGACAAACTTGGTGCAGATACCTTTGGCTCTCTCCATCTTAACCCAGATGGAATGTTTCCCAATCACATTCCTAACCCTGAGGACAAAACAGCCATGGCAATGACAAGAGCAGCAGTGTTAGAAAACTCAGCTGATCTTGGAATAGTCTTTGACACTGATGTGGACAGAAGTGGCGTGGTTGATAACAAAGGGAACTCAATCAATGGTGACAAACTCATTGCTCTAATGTCTGCCATTGTATTGAAGGAAAATCCAGGATCAACTATAGTGACCGATGCGCGAACAAGTATGTCACTCACTAAATTCATAACTGATAGAGGAGGTCACCATTGTTTATATCGCGCTGGTTATCGAAATGTCATCGACAAGGGAGTTCAGCTTAACATGGATGGAATTGAAACACATCTTATGATGGAAACATCTGGTCATGGTGCTTTGAAAGAAAACCATTTCCTTGATGATGGCGCCTACACGGTGGTAAAAATTATAATTGAAATGGTAAGAATGAAGCTTGGTGGATCAGATGAAGGAATTGGTAGTCTTATAAAAGATCTTGAAGAGCCTTATGAATCAATAGAACTAAGGATAAATATCATTTCTGAACCTCGAAATGCTAAAGCAAAAGGATCGGAGGCCATCGAAACGTTTCGAAACTACATCGAGGAAGGGAGGCTTAAAGGGTGGGAATTAGACTCATGTGGTGACTGTTGGGTGAGTGAAGGTTGCCTTGTTGATACAAATGACACCCCAACTCACATTGATGCTCAAATGTACAGGGTAAAAGTATCAAACAATGAACATGGACAACATGGTTGGATACACATGAGGCAGAGTATTCACAACCCAAACATTGCTGTGAACCTGCAATCATCTGTTCATGGAGGCTGCTTGTCTATGGCAAGAGCTTTCAGAGATGATTTTCTCAAAGCAAGTGGAGTTGATACATTCCTAGACATTGCTCAAATTGATAAGTTTGTTGAAAATGGCCCATTAGCCTGA 1863 0.4128 MAASTSSPNISTSLRRKTRKTNYPSLLGKNISLHTKLGFSSSVPFNKSLNVKSYGAAKYDEVVDEELDKIRRLQNGSDVRGVALEGEKGRTVDLTPPAVEAISESFGEWVINGLEKEKGYPVENVSVSLGRDPRISASKLSVAVFAGLARAGCMTFDVGLATTPACFMSTLLPPFVYDASIMMTASHLPYTRNGLKFFTKRGGLTSLEVEEVCDKAARKYANRMAKVSTLLNVLPTKVDFMSAYSKHLREIIKERIGHPLHYETPLKGFQIIVNAGNGSGGFFTWNVLDKLGADTFGSLHLNPDGMFPNHIPNPEDKTAMAMTRAAVLENSADLGIVFDTDVDRSGVVDNKGNSINGDKLIALMSAIVLKENPGSTIVTDARTSMSLTKFITDRGGHHCLYRAGYRNVIDKGVQLNMDGIETHLMMETSGHGALKENHFLDDGAYTVVKIIIEMVRMKLGGSDEGIGSLIKDLEEPYESIELRINIISEPRNAKAKGSEAIETFRNYIEEGRLKGWELDSCGDCWVSEGCLVDTNDTPTHIDAQMYRVKVSNNEHGQHGWIHMRQSIHNPNIAVNLQSSVHGGCLSMARAFRDDFLKASGVDTFLDIAQIDKFVENGPLA 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01786 620 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 356 456 IPR005846 GO:0005975|GO:0016868
Car06g01786 620 CDD PMM_PGM 73 593 - -
Car06g01786 620 PANTHER OS06G0476200 PROTEIN 15 617 - -
Car06g01786 620 SUPERFAMILY Phosphoglucomutase, first 3 domains 356 458 IPR016055 GO:0005975|GO:0016868
Car06g01786 620 Gene3D - 74 229 - -
Car06g01786 620 PRINTS Phosphoglucomutase/phosphomannomutase family signature 179 193 IPR005841 GO:0005975|GO:0016868
Car06g01786 620 PRINTS Phosphoglucomutase/phosphomannomutase family signature 268 287 IPR005841 GO:0005975|GO:0016868
Car06g01786 620 PRINTS Phosphoglucomutase/phosphomannomutase family signature 303 316 IPR005841 GO:0005975|GO:0016868
Car06g01786 620 PRINTS Phosphoglucomutase/phosphomannomutase family signature 332 347 IPR005841 GO:0005975|GO:0016868
Car06g01786 620 SUPERFAMILY Phosphoglucomutase, first 3 domains 77 252 IPR016055 GO:0005975|GO:0016868
Car06g01786 620 SUPERFAMILY Phosphoglucomutase, first 3 domains 243 354 IPR016055 GO:0005975|GO:0016868
Car06g01786 620 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 72 220 IPR005844 GO:0005975|GO:0016868
Car06g01786 620 PANTHER PHOSPHOHEXOSE MUTASE 15 617 - -
Car06g01786 620 Gene3D - 349 471 - -
Car06g01786 620 Gene3D - 270 348 - -
Car06g01786 620 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 244 352 IPR005845 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01786 Car-Chr6 17733422 17737754 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01786 06 17733422 17737754 Car06g01786 06 17733422 17737754 ECH