Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01785 ATGTCTGATTCATTCTGTAGTTTTCTCTCTGCCACTCCAAATTCCAACCATAATTCCCATGCACCTCCAAAAATCGCCACAATATCTTCAATAGTCCAACCTTATTGTATTTGCACACATTGCAATCATCTCCTCCCCTTCAATCACCACGTTGAACAAGAACAAGAACAAGGAACAAGCAATAATATGCAGGGTCAACAAAGCTCAAGATGGAGTCCAACACCAGTTCAATTACTAGTCCTTGAAGAATTGTATAGGCAGGGAATGAAGACACCATCAGCTGAACAAATACAGCAAATAGCTTCACAGCTTAGACAATTCGGGAAGATTGAAGGGAAAAATGTGTTCTACTGGTTCCAAAATCACAAGGCAAGAGAGAGACAGAAGCGTCGTCGCCGTGAGATGGAGGAAACTACTGCTTCTTCAACTCAAGATAAAAAGGATAAACACAAGTTTCTTATGGGAAATTCTCAAATGCAAGAGGATGCAGGGTTGAAAGAGACAAAGAAGTGGGCATCCACTTCAAACTGCAGTGAACATGCAGAGGAAAATGCAGTAGCACTGGATATAGCAGAAAAGGGATCAAGTGGGTGGGCTCAGTTTGAAGAGAGAGACATACAACTACAAGTATTGAGGAAAAACATAGCAGAAAAGCAAGGAAAGTGCCAAAATATTGAAATTCCATATTACTTTCCACCTTTTACTATACCAACTACTACAACAAGTTCAACTTCAGTAGCAGCATACAGAACATTATGTAGTAATAATAATAACACACAAATTTTAACCCCTCCAAATTATGTACTCAATAGAGAAAATTTAAAGTATTATGAAGAACAAAATGCAGAACCTCGTACACTAGACCTTTTTCCAGTTAAAGGGGATCATGAATTACAAGATCAGAGGAAATCTATGTTCTGTGTTAATGATTCTATGGACACTGAAATCATCACCTCCTCCAACCAGTTTTTTGAGTTTCTTCCTTTAAGAAATTGA 996 0.3825 MSDSFCSFLSATPNSNHNSHAPPKIATISSIVQPYCICTHCNHLLPFNHHVEQEQEQGTSNNMQGQQSSRWSPTPVQLLVLEELYRQGMKTPSAEQIQQIASQLRQFGKIEGKNVFYWFQNHKARERQKRRRREMEETTASSTQDKKDKHKFLMGNSQMQEDAGLKETKKWASTSNCSEHAEENAVALDIAEKGSSGWAQFEERDIQLQVLRKNIAEKQGKCQNIEIPYYFPPFTIPTTTTSSTSVAAYRTLCSNNNNTQILTPPNYVLNRENLKYYEEQNAEPRTLDLFPVKGDHELQDQRKSMFCVNDSMDTEIITSSNQFFEFLPLRN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01785 331 MobiDBLite consensus disorder prediction 127 147 - -
Car06g01785 331 SMART HOX_1 66 133 IPR001356 GO:0003677
Car06g01785 331 MobiDBLite consensus disorder prediction 130 147 - -
Car06g01785 331 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 26 331 - -
Car06g01785 331 ProSiteProfiles 'Homeobox' domain profile. 64 129 IPR001356 GO:0003677
Car06g01785 331 Pfam Homeodomain 68 128 IPR001356 GO:0003677
Car06g01785 331 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 26 331 IPR044555 GO:0003700|GO:0099402
Car06g01785 331 CDD homeodomain 70 124 IPR001356 GO:0003677
Car06g01785 331 Gene3D - 68 135 - -
Car06g01785 331 SUPERFAMILY Homeodomain-like 62 131 IPR009057 -
Car06g01785 331 MobiDBLite consensus disorder prediction 52 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01785 Car-Chr6 17716310 17718540 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01785 68 183 Wox Gene Family AT3G18010 56.198 2.01e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Car06g01785 Homeodomain 4.9e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01785 06 17716310 17718540 Car06g01785 06 17716310 17718540 ECH