Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01775 TCACTAGAAAATTTTAAATATCATCACCAGAAAACTTGTTTTGCTTTCAGTTTTATTGAAATGTACCTTAGACCACCTTCGGCTAGTGAAGAAGCAGGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAGGTATTATTTATCCCTTGGTGACCAGAGGATTGTTGACAAAAATTTTATCATCAGGCCAAAAGCTGAGTTTGAGGTTGGACGAATGACATTGGGTGGGTTGCTGGCTCTTGGGTACATTGTTGTGGTTAGTTATAAACGTGCATCCACAACTGTCGATTATGGCAAGGTTTCCATGTCGTTTGAAACCATTGATGTTCTTGGTGAGACATTCATGGTCATGAGAGGAACCGATAGGAAGACTGTTGGAACAGAAGCATTGAGGATGGGTATCAACGGACCTTGGATCACTAAATCATATCTGGAAATGATTCTTGAGAGAAAAGGTGTACCCCGTCTTAGTACACCACCACTTGTGTCTAATACAACTGTGACTGGCAGTCAAGAAACAGCAATCATTGCACCAAAGCCAATTCGTGTTAGCCCTAGCCTTGTTACTGGGCTTGAGGATTTATCTCAGCCATGGACCCGATCCCCAACAAAATCCAAAACAGAACCTTTTGTGGCTACATGGCATTTCATATCTTCAGATTCCTCCCATCTTGATAACACAGTCCTAGATCCCTCATCTTTCAGGGACACTGTTAGGCTTGCTCCAATGCCCGATTCATATGACCTGGATAGGGGATTGCTTTTGGCAGTTCAAGCAATACAAGCCTTGTTGGAGAATAAAGGCGTACCAGTCATTGTTGGAATTGGTGGTCCAAGTGGGTGTGGGAAGACAAGTTTGGCTCATAAAATGGCAAATATTATTGGTTGTGAAATAGTTTCCCTAGAAAGTTATTACAAACAAGTTAAGGATTTCAAATATGATGACTTCAGCTCACTTGATTTATCTTTGCTATCAAAGAATATTGATGACATAAGAAATGGCCGAAGAACAAAAGTTCCTATATTTGACTTGGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGCGTCTATGCTTTGCATCCTGATATCCGGATATCACTTGACTTGTGGATTGCTGTTGTAGGAGGTGTTCATTCACATTTGATTTCACGAGTTCAAAGGGATAAGAGTAGAGTGGGATGTTTTATTTCCCAAAATGAGATCATGATGACAGTGTTTCCTATGTTCCAGCAGCTTATTGAACCTCACCTTGTTCATGCACATCTTAAAATTCGAAATGACTTTGACCCTGTGCTTTCTCCCGAAAGTTCACTTTTTGTATTGAAGAGTAACAAAAAAGTAACTTATCAAGATATTCTAGCGATTCTTGATCCAGCAAAATTTTGCAGTTCCGTGCAGAAATTTATCGATATTTACATGAGGCTTCCTGGGATCCCTTCTAATGGTCAATTGACAGATAGTGATTGTATTCGGGTCAGAATATGTGAAGGCAGATTTGCATTACTGATACGCGAGCCTATAAGAGAAGGAAACTTCATCATTCAGCCTAAAGTGGATTTTGATATTAGCATTACTACGGTTGCTGGTCTTCTTAACCTCGGGTATCAAGCAGTTGCGTATATTGAAGCGTCTGCATTCATCTATCAGGATGGAAAGATTCTAATTGAGGTTGATCATCTACAAGATGTCCCGGGTCCATACATTCAGATAAAGGGTGTTTCTAAAGATGCTGTTGCAGCAGCAGGTTCAATGCTTAAATTGGATGGTTCATATACTACTAAGAGTTACCTTGAAATAGTTTTGGAAAGATTACCAACAACGGAGAGAACTTCTGGTGGGATTAACTTTCAGCAATCAACAAGGCTGCTAGAGATTGTGGACTTTATTCAATCTCAGGGATGTAGCTCTTCTTCCGAATCCTCATCAAGTAGGGTAGTCTCTCCAATTGAGGGCATTATTGAAGAGATGCAATCAAGGATTAAAAGGCTCGAAAGGTGGCTTGCTATAAATACGGTTTTGTGGACATTTCTAATGTCAGCCATTGTTGGTTATTCACTTTATCAAAGAAGGCGTTAA 2121 0.4012 SLENFKYHHQKTCFAFSFIEMYLRPPSASEEAGINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYIVVVSYKRASTTVDYGKVSMSFETIDVLGETFMVMRGTDRKTVGTEALRMGINGPWITKSYLEMILERKGVPRLSTPPLVSNTTVTGSQETAIIAPKPIRVSPSLVTGLEDLSQPWTRSPTKSKTEPFVATWHFISSDSSHLDNTVLDPSSFRDTVRLAPMPDSYDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGCGKTSLAHKMANIIGCEIVSLESYYKQVKDFKYDDFSSLDLSLLSKNIDDIRNGRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRISLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVTYQDILAILDPAKFCSSVQKFIDIYMRLPGIPSNGQLTDSDCIRVRICEGRFALLIREPIREGNFIIQPKVDFDISITTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVSKDAVAAAGSMLKLDGSYTTKSYLEIVLERLPTTERTSGGINFQQSTRLLEIVDFIQSQGCSSSSESSSSRVVSPIEGIIEEMQSRIKRLERWLAINTVLWTFLMSAIVGYSLYQRRR 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01775 706 CDD UMPK_like 274 442 - -
Car06g01775 706 Gene3D - 271 448 IPR027417 -
Car06g01775 706 SMART AAA_5 271 415 IPR003593 -
Car06g01775 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 260 442 IPR027417 -
Car06g01775 706 Gene3D - 456 619 - -
Car06g01775 706 PRINTS Uridine kinase signature 272 289 - -
Car06g01775 706 PRINTS Uridine kinase signature 393 403 - -
Car06g01775 706 PRINTS Uridine kinase signature 299 310 - -
Car06g01775 706 SUPERFAMILY CYTH-like phosphatases 480 614 IPR033469 -
Car06g01775 706 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 359 698 - -
Car06g01775 706 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 13 175 - -
Car06g01775 706 PANTHER URIDINE KINASE 359 698 - -
Car06g01775 706 PANTHER URIDINE KINASE 248 359 - -
Car06g01775 706 PANTHER URIDINE KINASE 13 175 - -
Car06g01775 706 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 248 359 - -
Car06g01775 706 Pfam Phosphoribulokinase / Uridine kinase family 274 439 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01775 Car-Chr6 17617757 17634596 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01775 267 430 PRT Gene Family AT1G55810 24.719 7.08e-09 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01775 06 17617757 17634596 Car06g01775 06 17617757 17634596 ECH
Car06g01775 06 17617757 17634596 Car07g00855 07 7559631 7566128 PCT