Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01774 ATGAAGATGCAGAATGAGTCAACCACCCTCTTCATCAACACCTTTCTTTTCTTCTGCATCTCCATCTTACAGTTTCAGAGCTCTCTCTCAGTCACAGATTCATCAACATCAACCCATATATCATTCCCCAAAGAAGCACTTCCCACCAAATCAGGTTACCTACCTGTAAGCTCAACCTCTGCATCCTCTATTTTCTACACATTCTATGAAGCACAGAGCTCAACCTCACCTCTCTCCCAAACTCCACTTCTCATTTGGCTTCAAGGTGGTCCTGGCTGCTCCTCCATGATCGGCAACTTCTACGAACTCGGACCTTGGCGTGTCACCAATTCACTCACACTTGAACCCAACCCTGGTGCTTGGAATAGAATATTTGGTCTTCTTTTTCTTGATAGTCCTATCGGGACTGGCTTCAGTGTAGCCTCAACGCCACAAGAGATTCCAACGGATCAAAACGGTGTAGCCAAACATCTTTTTGCTGCTATAACAAGGTTTGTTCAACTTGACTCTGTTTTCAAGCATCGTCCTATTTATATTACTGGTGAAAGTTATGCTGGGAAATATGTTCCTGCAATTGGGTACTATATATTGGAGAAAAATGCTGAATTGAAAGACACTGAGAGGGTGAATTTGGCTGGTTTGGCAATTGGTGATGGGTTAACAGACCCTGTAACCCAAGTTGTTACTCATGCTGCAAATGCTTATTATGTTGGATTGATCAATGAGAGGCAAAAGAATGAGTTGGAAAAATCTCAACTTGAAGCTGTTGGGTTGGTACATAAAGGGAATTGGAGTGAAGCAACTGATGCAAGAAACAATGTGTTGAGTTTGTTGAGAAATATGACAGGGTTGGCTACTTTGTATGATTATTCGCGTAAAGTTCCTTATGAAGATGATTTGGTTGGCCAGTTTTTGAACATTGCTGAGGTGAAGAAGGCTTTGGGGGTGAACGTTGACGAATCGTTTGTTTATGAGATATGTAGTGACATAGTTGGGGATGTATTAAATGCTGATGTGATGAAAAGTGTGAAATATATGGTGGAAAAGTTATTAAGGGAGAGTAGGGTGTTGATGTATCAAGGTCAACGTGATTTGAGGGATGGTGTGGTTCAAGTTGAGGCTTGGGTGAAGACTATGAAATGGGAAGGGATTGTTGAGTTTCTGAAGGCTGAGAGGGAGATTTGGAAGGTAAATGGAGAAGTGGCTGGTTATGTACAAAAATGGAAGTCGCTTACTAATGTTGTGGTTTTGGGGGCTGGACATCTTTTGCCTACTGATCAGCCTTTGAATTCTCAAGCAATGATTGAAGATTGGGTATTGAAAAAGGGTTTGTTTGGAATTGTACCCGACCGAAATGTATCCAAAAATGTGTTTGATGACTAA 1383 0.4158 MKMQNESTTLFINTFLFFCISILQFQSSLSVTDSSTSTHISFPKEALPTKSGYLPVSSTSASSIFYTFYEAQSSTSPLSQTPLLIWLQGGPGCSSMIGNFYELGPWRVTNSLTLEPNPGAWNRIFGLLFLDSPIGTGFSVASTPQEIPTDQNGVAKHLFAAITRFVQLDSVFKHRPIYITGESYAGKYVPAIGYYILEKNAELKDTERVNLAGLAIGDGLTDPVTQVVTHAANAYYVGLINERQKNELEKSQLEAVGLVHKGNWSEATDARNNVLSLLRNMTGLATLYDYSRKVPYEDDLVGQFLNIAEVKKALGVNVDESFVYEICSDIVGDVLNADVMKSVKYMVEKLLRESRVLMYQGQRDLRDGVVQVEAWVKTMKWEGIVEFLKAEREIWKVNGEVAGYVQKWKSLTNVVVLGAGHLLPTDQPLNSQAMIEDWVLKKGLFGIVPDRNVSKNVFDD 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01774 460 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Car06g01774 460 Pfam Serine carboxypeptidase 47 439 IPR001563 GO:0004185|GO:0006508
Car06g01774 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 447 IPR001563 GO:0004185|GO:0006508
Car06g01774 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Car06g01774 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Car06g01774 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Car06g01774 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 411 424 IPR001563 GO:0004185|GO:0006508
Car06g01774 460 SUPERFAMILY alpha/beta-Hydrolases 47 440 IPR029058 -
Car06g01774 460 PANTHER CARBOXYPEPTIDASE 28 447 - -
Car06g01774 460 Gene3D alpha/beta hydrolase 26 445 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01774 Car-Chr6 17601397 17603984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01774 338 439 Calmodulin-binding Proteins AT2G22960 24.272 8.09e-07 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01774 06 17601397 17603984 Car06g01774 06 17601397 17603984 ECH