Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01766 ATGGATGGTTATAGAGAAGGGGCATTATCGTCATCTTACTACAATATTCTTGGTGTTAGTTCAGACTCTTCTATAGATGAGATAAAGCACGCTTACAGGAAGCTTGCTATGCAATGGCATCCAGATAGGTGCATAAGAATGCCTTCTGAATTAGGTGAAGCAAAATCTAAATTTCAGAAAATTCAAGAAGCCTATTCGGTGTTATCTGACCCTAAAAAAAGAACGATGTATGATGCTGGCTTGTATGATCCTCAAGAGGAAGAGGATGAGGGATTTTCTGATTTTGTGGAAGAAATGGTGGCCATTATGGCTCAAGTTAAGCGAGAGGAGAAGGTTTACGGATTGGAGGAGCTGCAGGCCATGTTCATGGAAATGGCTGAAGGATTTCAATCTACTTCAATGTATTGTGGGACACCATCGGTGGTTGATGAATCCTGTGTCAACAGAGGTGGTGTTTTGACACAACCGTCACTGATATAG 480 0.4146 MDGYREGALSSSYYNILGVSSDSSIDEIKHAYRKLAMQWHPDRCIRMPSELGEAKSKFQKIQEAYSVLSDPKKRTMYDAGLYDPQEEEDEGFSDFVEEMVAIMAQVKREEKVYGLEELQAMFMEMAEGFQSTSMYCGTPSVVDESCVNRGGVLTQPSLI 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01766 159 SMART dnaj_3 11 73 IPR001623 -
Car06g01766 159 Pfam DnaJ domain 13 78 IPR001623 -
Car06g01766 159 PRINTS DnaJ domain signature 14 32 IPR001623 -
Car06g01766 159 PRINTS DnaJ domain signature 32 47 IPR001623 -
Car06g01766 159 PRINTS DnaJ domain signature 53 73 IPR001623 -
Car06g01766 159 Gene3D DnaJ domain 9 133 IPR036869 -
Car06g01766 159 CDD DnaJ 13 70 IPR001623 -
Car06g01766 159 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 9 145 - -
Car06g01766 159 SUPERFAMILY Chaperone J-domain 12 84 IPR036869 -
Car06g01766 159 PANTHER PUTATIVE, EXPRESSED-RELATED 9 145 - -
Car06g01766 159 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Car06g01766 159 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01766 Car-Chr6 17499543 17502539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01766 13 79 C2H2 Transcription Factor Family AT1G74250 47.059 2.52e-15 70.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01766 06 17499543 17502539 Car06g01766 06 17499543 17502539 ECH