Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01549 ATGTTTTCTTTAGTATTGTTAATTAGTTTTTTTTATCTTGGCAGTGCTATAGATTGCGGTGGAAATAAAATTGCAAGTACTATTATTGTTGACCAACAAGGAAAAGGAGCATTTATAACAGTTCAAGGAGCCATTGATTCTATAAAAAGTTCAAATGCAAATTGGGTTATGATTAAAATAAATCCAGGTGTATACAAAGAAAAAGTTCAAATACCTAAGGAAAAGCCATGTATTATTTTAAAAGGATCAGGTATCAATATCACAACTATTACTTACGACGATTCATTTCAAAGCAATGGTACATTTATGAGCGCTACATTAATTTCATCTCCACCTAATGTTGTTCTGAGTGGCATTACATTCAAGAACACATATGATTTAGAGAACGGACCCGCAGTTGCAACTAATTTAGCTGGTGACAAATCTGCCATCTTCGACTGTAGTTTTATTGGTTATCAAGATACATTACTTGCAGCAGTTGGACGCTCTTACTTTAAAAATTGTTTTATTCAAGGAGAAATAGACTTTATTTTTGGTTCAGGCCAAAGTTATTTTGAGAATTGTGTGATAAATGCGGCACCAGGAAACAGAAGAAAGATTCCCGGTTATGTGACAGCACATAGAAGAGATTCAGCAGAAGATAGTAACGGTTTTGTTTTTAGAGGAGGGTCTGTTGTTGGAACAGGTCAAGTGCATCTTGGAAGACCTTGGAGCCTTTACGCAAGAGTTATATTTTGGGAAACATACTTTTCTTCTATAGTAACTCCCGAAGGATGGAATATTTGGAATTTAAAAGGTGGCCAAGAATTTAATACCACATTTGTAGAAGTTAATTGCACAGGACCAGGAGCCGATAAAAAAAACCGTGTTACTTGGGAGAAGCAACCAAGTAGTTTAAACCTAAATGATTTTACTTTATCATCTTTCATAGATTATGATGGTTGGCTTGCTCAAATACCATCTATAATTTAG 972 0.3457 MFSLVLLISFFYLGSAIDCGGNKIASTIIVDQQGKGAFITVQGAIDSIKSSNANWVMIKINPGVYKEKVQIPKEKPCIILKGSGINITTITYDDSFQSNGTFMSATLISSPPNVVLSGITFKNTYDLENGPAVATNLAGDKSAIFDCSFIGYQDTLLAAVGRSYFKNCFIQGEIDFIFGSGQSYFENCVINAAPGNRRKIPGYVTAHRRDSAEDSNGFVFRGGSVVGTGQVHLGRPWSLYARVIFWETYFSSIVTPEGWNIWNLKGGQEFNTTFVEVNCTGPGADKKNRVTWEKQPSSLNLNDFTLSSFIDYDGWLAQIPSII 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01549 323 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 322 - -
Car06g01549 323 Pfam Pectinesterase 28 311 IPR000070 GO:0030599|GO:0042545
Car06g01549 323 SUPERFAMILY Pectin lyase-like 24 317 IPR011050 -
Car06g01549 323 Gene3D - 21 321 IPR012334 -
Car06g01549 323 PANTHER PECTINESTERASE 2 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01549 Car-Chr6 15232524 15234014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01549 2 268 Carbohydrate Esterase AT2G19150 44.727 2.10e-69 216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01549 06 15232524 15234014 Car06g01549 06 15232524 15234014 ECH