Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01548 ATGGGTTTGAGTTCTAAACAGGTTTCTAGCAGTGGACTTGATAATTGGAAACAGAACTTATTGGAATCTCAAGACTTAGAGCTACCAAAACCTCATCACATGATGAGAAaacatcatcaacaacaacaacaacaacaacaaacagaacaGGTTTTGAAGTGTCCAAGATGTGAATCAACAAACACCAAATTTTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGAGCTTGTAAAAGACACTGGACTAAAGGTGGAACTTTACGCAATGTTCCTGTTGGTGGTGGCAGAAAAAATAAAAGGGTCAAAAAATCAAACACACCAATTACTTCTTCCACCACCAAAACCACAACAACAGCAACTAATGCTATTTGCACCCCCTCAATTTCAAATATGAATGGTAATGGTTTGAATAGCAACATGACTATTCAAACCCCTCTTGGAATTAGTGATCAAAAAAGTAATAATATTCCTTCATCTCTCTATCAAGCTCTTATTCATCCACCATCTTTGTTTCTACAACAGAGTTTGATGAATACTAGAGACTTATTAGAAAGCAAAGATTTTGGTATTGGTAATGGAATTTTTACTAGTACTAGTTGTTCAACTTATCCTATTCTTCCTCAAAATCAAAGCTTACTCTTCCCTTTTTCAACATCAAGTTCTTTTGACACTACCACTTGTCCTTCTTCCAATGTTTATTACTATGGTGAGGAGTTTAAAACAATGGAAGAACCAACCATCAACAGTATAGTTCCAAGCACAAAGCCATGGGAGATGTCATTACCAGGAACTACAACTGCTGGAATGGAAACTTCAAAGTATTGGAATTGGGAAGACATTGATTCATTAGTATCAACTGATTTAAAGGATCCTTGGGATGATTCTGATATCAAACCTTGA 915 0.3475 MGLSSKQVSSSGLDNWKQNLLESQDLELPKPHHMMRKHHQQQQQQQQTEQVLKCPRCESTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVKKSNTPITSSTTKTTTTATNAICTPSISNMNGNGLNSNMTIQTPLGISDQKSNNIPSSLYQALIHPPSLFLQQSLMNTRDLLESKDFGIGNGIFTSTSCSTYPILPQNQSLLFPFSTSSSFDTTTCPSSNVYYYGEEFKTMEEPTINSIVPSTKPWEMSLPGTTTAGMETSKYWNWEDIDSLVSTDLKDPWDDSDIKP 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01548 304 ProSitePatterns Zinc finger Dof-type signature. 54 90 IPR003851 GO:0003677|GO:0006355
Car06g01548 304 ProSiteProfiles Zinc finger Dof-type profile. 52 106 IPR003851 GO:0003677|GO:0006355
Car06g01548 304 PANTHER OS06G0284500 PROTEIN 38 236 - -
Car06g01548 304 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 38 236 IPR045174 GO:0003700|GO:0006355
Car06g01548 304 MobiDBLite consensus disorder prediction 93 119 - -
Car06g01548 304 Pfam Dof domain, zinc finger 50 104 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01548 Car-Chr6 15195660 15197322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01548 35 123 C2C2-Dof Transcription Factor Family AT5G60850 64.444 3.48e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car06g01548 zf-Dof 8.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01548 - - mtr:MTR_4g089095 345.895