Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01491 ATGGCATCACTCCCACACTTAGACGATGATTCCGTCACCCCCTCCCCTCGCTCCGATCACTACCAAGACCCCCTGCCACGTGTCCGCTTCATGTGCAGTTTCGGCGGCAAGATCCTCCCTCGTCCCTCCGACAATCAGCTCCGTTACGTTGGTGGAGACACCCGAATCGTTGCTGTTAACCGCTCCATCTCATTCCCCGCACTTATCCACAAGCTCTCTAAACTCTCCGGCACGAGCAGCATAACGGCAAAGTACCAACTACCAAACGAGGACTTAGACGCGTTGATCACAGTAACAACAGACGAAGACGTGGAGAACATGATGGACGAGTACGACCGCGTAGCACAGAATGACAACCCACGATCGGCTCGGCTTCGTCTCTTCCTCTTCCCAGAAGGCGAAGACTCTCGATCCAACAGCATCAGCTCGCTCTTAAACGGCTCAACTAAAAGGGAAAATTGGTTCATGGACGCATTAAACGGTGGCGTTTCGGGACTCGAACGTGGTCGCTCAGAAGCCTCTTCTATGCTTTCTGAAGTACCCGATTACCTATTCGGGTTGGATAATAACTCCGAAGAAACGATCCAACATATTCGTGAACCACGGCTCAAGGAACGACACCTTATTCAACAAGACAATGTTTCTAATTCGGATCCGGGTTCTCCTGCCCCGATTGTTTCTTCCCCGTTTTGTTCCACGTCATCATCTTTGTGCGTGCCTTCTATCCCGAATTTACCCCCGGTTAAAACTAAACCCGAAAACCCGGTTACTGACCCGGAATTCAAGGGGAATCAAATTAATACAACTGAAACGGTTGTGCAACCGCAAGTTCACTACGCGCAACCACAAGAAGCTGCTTATTCGGGTCATCATCATGCACAACCGGTTCAAGTTTATTATATTTCGAACCCGGTTCAAACTGGGAGTGCTCCGGTTCACCCGGTTCATATGCAAACGCATTATCCCTTTGTTCAACAACCGTATCATCATGCAGTGATGCAAGCTCAAGTTCCAATGGGGTATCATCAGATGGTTCCGGGTTCGGGTCAAGTTTATGGTGCGGGGATGAGGCATGTGGCCCCAGTACAGCCCTATAGTCCAACGGCTACGGTGGCTCGTGACGGTATGAAACAACAAGTGTATCAAGCTATGCCGAACTCTGGTACGATTCCGGTTTACCGCGCGGGGGATGAACCACAGAGAGCTGGAGCAGAGTTTGGAGCGGGTCGGGGTATCAACTTACCGAATAACTGA 1254 0.5072 MASLPHLDDDSVTPSPRSDHYQDPLPRVRFMCSFGGKILPRPSDNQLRYVGGDTRIVAVNRSISFPALIHKLSKLSGTSSITAKYQLPNEDLDALITVTTDEDVENMMDEYDRVAQNDNPRSARLRLFLFPEGEDSRSNSISSLLNGSTKRENWFMDALNGGVSGLERGRSEASSMLSEVPDYLFGLDNNSEETIQHIREPRLKERHLIQQDNVSNSDPGSPAPIVSSPFCSTSSSLCVPSIPNLPPVKTKPENPVTDPEFKGNQINTTETVVQPQVHYAQPQEAAYSGHHHAQPVQVYYISNPVQTGSAPVHPVHMQTHYPFVQQPYHHAVMQAQVPMGYHQMVPGSGQVYGAGMRHVAPVQPYSPTATVARDGMKQQVYQAMPNSGTIPVYRAGDEPQRAGAEFGAGRGINLPNN 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01491 417 MobiDBLite consensus disorder prediction 1 24 - -
Car06g01491 417 SMART PB1_new 42 132 IPR000270 GO:0005515
Car06g01491 417 CDD PB1_UP2 31 130 - -
Car06g01491 417 SUPERFAMILY CAD & PB1 domains 43 139 - -
Car06g01491 417 Pfam PB1 domain 44 131 IPR000270 GO:0005515
Car06g01491 417 PANTHER OS05G0427100 PROTEIN-RELATED 5 396 - -
Car06g01491 417 Gene3D - 48 131 - -
Car06g01491 417 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 5 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01491 Car-Chr6 14529816 14531576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01491 17 175 MAP Kinase Kinase Kinase AT3G46920 40.000 4.61e-32 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01491 06 14529816 14531576 Car06g01491 06 14529816 14531576 ECH
Car06g01491 06 14529816 14531576 Car08g01660 08 26452773 26456207 ECH
Car06g01491 06 14529816 14531576 Car06g00200 06 2178390 2179675 ECH