Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01238 ATGAGACTCTCAGTTGTGCATTTGGTCTTACTATTGATAGTGGGAAATCTCTTTGATTCAAGCTACATAGGAGGGGGAACTTTCATTGTTGATTCCGCTAGAACCCAAATCATCAACTGCTTCTTCCTTCATTTCACCACAGAAGGAATTCTAGTACAGCAAGGACATGAGACATTCATATCAAGCTGTTTTCTTGGACAACACTTAACAGTTGGTGGAGACCAAGGTGAGAAGGACTATTCAGGAGTTGGTATTGATCTTGCTAGTAATGATAATGCAGTAACAGATGTTGCAATTTTCTCAGAAGACATTGGGATTGTTCTAAGGGTTCAACATTCTAACGGAGTGGATATTATGTTCAGTGGTGATCCTAATAAGAAGATTCCAATTGTAAATGTAGATGGGCAATTTAGTAATATTGATCAAGTGGTGATCGATAGAAACAATGTGAATGGTATGGGATTGAGATCAACGGTTGGGAAGTTAGCTGTGAGTGGTAATGGCCCAAAGTGGGAGGCGGATTTTTCAGCAGTTTTGGTGTTTCCTAACCGAATTAGTCATGTTCAATATTCATTTCATGCTCCAGAGGAGCCAAAATTTGTAGCACATTCTATTACCAAAGTGTCAGGTAATGTCGTAGTTGTGAAGAGAGAAAAAGAAGCTGTAGGTTTCGTATTCTTCAGTGTTGAACAATAA 696 0.3894 MRLSVVHLVLLLIVGNLFDSSYIGGGTFIVDSARTQIINCFFLHFTTEGILVQQGHETFISSCFLGQHLTVGGDQGEKDYSGVGIDLASNDNAVTDVAIFSEDIGIVLRVQHSNGVDIMFSGDPNKKIPIVNVDGQFSNIDQVVIDRNNVNGMGLRSTVGKLAVSGNGPKWEADFSAVLVFPNRISHVQYSFHAPEEPKFVAHSITKVSGNVVVVKREKEAVGFVFFSVEQ 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01238 231 SUPERFAMILY Pectin lyase-like 13 154 IPR011050 -
Car06g01238 231 PANTHER POLYGALACTURONASE QRT3 114 231 IPR039279 GO:0004650
Car06g01238 231 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 17 111 - -
Car06g01238 231 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 114 231 - -
Car06g01238 231 PANTHER POLYGALACTURONASE QRT3 17 111 IPR039279 GO:0004650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01238 Car-Chr6 12223788 12224871 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01238 06 12223788 12224871 Car06g01238 06 12223788 12224871 ECH