Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01235 atgaatatgaatatgaatatgaacatgaacatgaatatgaaCCCTTCTTTTTCTTACACATTCCCCATCACTAGTGGCACCCCCAACATCACTACTAACACCACCACTTCCATTGCTACAAATTACAACACTACTACTCCATGGATGAACAGTAGAATATGGAGTAAGCTTCCACAAAGACTACTTGATCGCATCATAGCATTCCTTCCACCACCTGCATTCTTCAGAGCACGTTCTGTTTGCAAGAGATTCTACTCTCTTCTCTTTTCCAATACTTTCCTCGAACTTTACCTTCAAGTTTCACCTCCTTCTCACTGGTTCTTGTTCTTCAAACACAAAACCAAAAAaactaacatctacaaaaacaacaataatgtcacaaccaccactactactactactgctagtactaATGATTCCTTTGAATGTTACCTCTTTGATCCCAAAGAAATGTCATGGTACCGAATTTCCTCTGCTTTAATACCCTGTGGTTTTTCACCATCTTCTTCATCTTCTGGTTTACTCTGTTGGGTTTCTGATGAATCAGGTCCAAAAACAATGCTTTTAAACAACCCTTTACTCGGTTCAATAACTCAGTTACCAGCAACTTTGATTCCAAGACTCTTCCCTTCAATTGGATTAACCATTACACCAAGTTCCATTGATGTAACTGTTGCAGGTGATGACATGATATCACCATATGCAGTTAAAAATCTAACATCAGAGAGTTTCCACATTGATGCAAGTGGATTTTACTCCATATGGGGAACAAACTCATGTTTACCAAGATTATGCAGTCTTGAATCAGGTAGAATGGTTTATTCACAAGGGAAATTTTACTGCATGAATTGTAGTCCTTTTAGTGTTTTATGTTATGATGTGAGTTTGAACACATGGTTCAAGATTCAAGCACCTATGAGAAGGTTTTTAAGGTCACCAAATCTAGTAGAGTGTAATGGAAAATTGTTGCTAGTTGCTGGTGTTGAGAAGAGTAAGTTGAATGTTCCAAAGAGTTTGAGGGTTTGGAGTTTACAAGGATGTGGGAGTGTTTGGGTTGAAACAGAGAGAATGCCACAGCAACTTTATGTTGAGTTTTGTGAAATGGAGATTGGGAACAATGGTTTTGAGTGTGTTGGAAATGGTGAGTTTATTGTGATTATGATTAAAGGAAGAAGTGATAATAAAGGTTTGGTTTATGATATGTTGAGGAAGAGATGGCAATGGATTCCAACATGTCCTTATGTTGGTTATGATGGCTTTGAATTGCATGCTTTTGCTTATGAACCTAAGTTGGCTACTCCTGTTACTGCTTTACTTGATCAATTGGCTATGCCTCTTCCACACTTTTAG 1350 0.3526 MNMNMNMNMNMNMNPSFSYTFPITSGTPNITTNTTTSIATNYNTTTPWMNSRIWSKLPQRLLDRIIAFLPPPAFFRARSVCKRFYSLLFSNTFLELYLQVSPPSHWFLFFKHKTKKTNIYKNNNNVTTTTTTTTASTNDSFECYLFDPKEMSWYRISSALIPCGFSPSSSSSGLLCWVSDESGPKTMLLNNPLLGSITQLPATLIPRLFPSIGLTITPSSIDVTVAGDDMISPYAVKNLTSESFHIDASGFYSIWGTNSCLPRLCSLESGRMVYSQGKFYCMNCSPFSVLCYDVSLNTWFKIQAPMRRFLRSPNLVECNGKLLLVAGVEKSKLNVPKSLRVWSLQGCGSVWVETERMPQQLYVEFCEMEIGNNGFECVGNGEFIVIMIKGRSDNKGLVYDMLRKRWQWIPTCPYVGYDGFELHAFAYEPKLATPVTALLDQLAMPLPHF 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01235 449 SUPERFAMILY F-box domain 47 125 IPR036047 GO:0005515
Car06g01235 449 SUPERFAMILY Galactose oxidase, central domain 99 415 IPR011043 -
Car06g01235 449 ProSiteProfiles F-box domain profile. 51 100 IPR001810 GO:0005515
Car06g01235 449 PANTHER PROTEIN UNUSUAL FLORAL ORGANS 54 432 - -
Car06g01235 449 PANTHER F-BOX/KELCH-REPEAT PROTEIN 54 432 - -
Car06g01235 449 Gene3D - 49 94 - -
Car06g01235 449 SMART fbox_2 57 97 IPR001810 GO:0005515
Car06g01235 449 Gene3D - 110 420 IPR015915 GO:0005515
Car06g01235 449 Pfam F-box domain 54 88 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01235 Car-Chr6 12210240 12211600 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01235 06 12210240 12211600 Car06g01235 06 12210240 12211600 ECH
Car05g02007 05 65371268 65375260 Car06g01235 06 12210240 12211600 PCT