Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01208 ATGTGTTCTGTTAACGACGACCTTCCTCAACTCGAACTTGAACTGGGCCTTCTTCAGGGTGAAGGAAGCCAACAATACACAGGAGATGGCTCTGTTGACTTTAGAGGGAGGCCTGCTATTAAGCACAATACTGGCAATTGGAGGGCTTGTCCATTTATTCTAGGCAATGAATGCTGTGAACGTTTGGCTTTCTTTGGCATTGCAACAAACCTTGTTACGtatcttaccaccaaactacatgaaggaaatgcttctgctgctagaaatgtcagcatctggcaaggaacttgctatcttACACCACTCATTGGAGCTGTTCTTGCAGATGGTTACTGGGGACGATACTGGACAATTGCTGTTTTCTCTATGATTTATTTCGTTGGGATGTGTATCTTGACTCTTTCTGCATCTGTTCCAGCGTTGAAGCCACTTGAGTGTTTGGATTCGGTATGTCCTCCGGCTACTCCTACACAATATACTGTGTTCTACTTTGGTCTCTATGTAATTGCACTAGGGACTGGTGGTGTAAAAGCATGTGTGCCGTCTTTTGGGGCAGATCAGTTTGATGATACTGATTCCAAGGAAAAGGCCAAGAAGGCTTCCTTTTTCAACTGGTATTACTTTTCTATTGACCTTGGTGCCATTGCATCATGCAGCTTCATTGTGTGGGTTCAAGATAATGCAGGTTTCTTTTTAGGCACCTCTCTCTACAGGTTTCAAAAACCAAGGGGTAGCCCTATTACAAGAATGTGTCAGGTTGTGCTTGCGTCTGTTCGGAAGAAGAATCTGGTTGTGCCTGAGGACAGTAGTCTCCTGTATGAGATGCCAGACAAGAAATCTGGAACTGAAGGAAGTCGCAAGCTGATGCATAGAGATGATCTGAGGTATTTTGATAGAGCAGCTGTAGTGTCTGCTTCAGAGAACAGAAGTGGTGAATATTCTAATCCATGGAGGCTTTGCACCGTGACACAGATGTCAACATTGTTTGTGGAGCAAGGAACTATGATGGACACTAGTATTGATTCCTTCAAATTATCCCCGGCTTCCCTCTCAACCTTTGATGTGGTAAGTGTTGTTTTGTGGGTCCCCGTCTACGACAAGATACTTGTTCCTATTGCAAAGAAATTTACAGGCAAGAAAAGGGGCTTTTCCGTATTTCAAAGAATAGGAATTGGCCATTTTATTTCTGGGCTGTGCATGGTATCAGCTGCTATTGTGGAGATTAAGCGTCTGCAGCTTGCAAGAGAGCTTGATCTTGTTGATAAACCTGTGGCCGTACCCCTTAGTGTATTCTGGCAAATACCTCAATATTTCTTAGTAGGCGCATCGGAGGTATTCACATTCATTGGGCAGCTTGAGTTCTTCTATGATGAATCACCGGATGGTATGCGGACTTTATGCAGCGCACTGCCGCTCCTGAATTTTTCATTGGGGAATTACCTGAGCTCTTTCATTCTTACTATGGTAACTTACTTCACTACACAAGGGGGAAATCCTGGATGGATTCCAAATAACTTGAACAATGGACATCTTGATTACTTTTTTCTACTCTTATCTGGACTTACCTTATTAAATATGTTGGCGTTCATACTTGCTGCCAAAATGTACAAGCAGAAGAAGTCGAGACTAAGAATGGAACATTTAGAGAAACCTAATAGATTATTTCTGGAAGATGGTCTTCTGCAGTCTGAAGACAGTCTTCACACAGGAGATAGGTCAGTGAACATAAAGGGAGAGCTTGCTGTCAAGTGTGAAACTGGGACATGGAAAGCATGCCCCTTTATTTTAGGTACTTTCTTTTGTGAACGTTTGGCATATTATGGGATTGCTACAAATCTTGTCACTTATCTCACCACCAAACTACATCAAGGACTTGTTTCAGCCGCGAAAAATGTTACAGCTTTTCAAGGAACTTGCTATCTTACACCTCTCGTTGGATCCTTCTTCGCCGATGCTTACTTGGGAAGATACCGGACAATTGCAGTGTTCTACGGAATCTATCTCATTGGAATCTGCATATTGATTCTTTCAGCAACTATTCCGGCATTGAAGCCAATGGAATGTGTGGGTTCTGTATGTCCATCAGCAACTTTACCTCAAAGTTCTGTGTTCTTCATTGGACTCTTTTTAATTGCACTAGGGACTGGTGGAATCAAGCCATTCACTATATTGGTATGGACTGAAGAAAATCTTGGTTGGGGACTTGGATATGGAATTTCTGCATTGTTTGTTGGTATTGCAATCCTAATTTTCTTTCTAGGTACACCAATTTATAGATTTCAAAGGCCAAGGGGAAGTCCTCTTACAAAAATTTGCCAGGTGATTTCTGCTGCTTTTTTCAAGAAGAATTTGGAGGTTCCACAAGACAGTTGTCTCCTCTTTGAAATAGCAGTGAGGAATTCCTCCATAGAAGGAAGTCCTAGACTAGAGCATAGTGATGGATTGAGGTTCCTTGATAAAGCAGCAGTGATATCGGATGCAGAAAAAGAGTGCGGCGAAGTGACTAGTTCATGGAGGCTTTGTACAGTCACACAAGTGGAAGAGTTAAAGATTTTGATCCGAATTTTTCCAATCTGGGCATCAGGAATCATCTTCTCTTCTGTTTATGCACAAATGTCTTCATTGTTTGTTGAACAAGGCAAAATGATGGACACAACTATTTCTTCTTTGAAAATTCCGGCAGCCTCTCTTTCAACTTTTGACATCATAGCTGTCATTATTTGGGTTCCAATTTATGATAAAGCGATTGTTCCAATAGCAAGAAAATTCACTAACAAAGTAAGAGGCTTCTCAGAATTGCAAAGAATGGGAATTGGCCTTTTACTCTCCATTATTTGCATGTCATCTGCTGCATTAGTAGAGAGCAAGAGATTGCAAATAGCAAAAGAATTCGATTTGATAAAAGAAAATATCTCTGTACCATTTAGTATATTATGGCAGATACCTCAATATTTCTTGCTTGGTGCTGCTGAGGTATTCACTTTTGTTGGACAACATGAGTTTTTCTATGAACAAGCGCCGGACGGCATGCGCAGTTTCTGCAGTGCATTGGCACTTTTAACAAATTCTGTGGGGAATTATTTGAGCTCTTTGATTCTCACCATTGTTGATTACATCACAACAGAAGATGGAAAATGTGGATGGATAACAAATAATTTGAATGAGGGTCATCTTGATTATTTTTTCTGGCTTCTAGCTGGACTTAGTTTGTTAAATATGTTGGTGTACATTTTTTATGCGAGACAGTACAAACAAAAGAAGGTTTGTCATTTGAGTCTTCCTTAA 3285 0.3997 MCSVNDDLPQLELELGLLQGEGSQQYTGDGSVDFRGRPAIKHNTGNWRACPFILGNECCERLAFFGIATNLVTYLTTKLHEGNASAARNVSIWQGTCYLTPLIGAVLADGYWGRYWTIAVFSMIYFVGMCILTLSASVPALKPLECLDSVCPPATPTQYTVFYFGLYVIALGTGGVKACVPSFGADQFDDTDSKEKAKKASFFNWYYFSIDLGAIASCSFIVWVQDNAGFFLGTSLYRFQKPRGSPITRMCQVVLASVRKKNLVVPEDSSLLYEMPDKKSGTEGSRKLMHRDDLRYFDRAAVVSASENRSGEYSNPWRLCTVTQMSTLFVEQGTMMDTSIDSFKLSPASLSTFDVVSVVLWVPVYDKILVPIAKKFTGKKRGFSVFQRIGIGHFISGLCMVSAAIVEIKRLQLARELDLVDKPVAVPLSVFWQIPQYFLVGASEVFTFIGQLEFFYDESPDGMRTLCSALPLLNFSLGNYLSSFILTMVTYFTTQGGNPGWIPNNLNNGHLDYFFLLLSGLTLLNMLAFILAAKMYKQKKSRLRMEHLEKPNRLFLEDGLLQSEDSLHTGDRSVNIKGELAVKCETGTWKACPFILGTFFCERLAYYGIATNLVTYLTTKLHQGLVSAAKNVTAFQGTCYLTPLVGSFFADAYLGRYRTIAVFYGIYLIGICILILSATIPALKPMECVGSVCPSATLPQSSVFFIGLFLIALGTGGIKPFTILVWTEENLGWGLGYGISALFVGIAILIFFLGTPIYRFQRPRGSPLTKICQVISAAFFKKNLEVPQDSCLLFEIAVRNSSIEGSPRLEHSDGLRFLDKAAVISDAEKECGEVTSSWRLCTVTQVEELKILIRIFPIWASGIIFSSVYAQMSSLFVEQGKMMDTTISSLKIPAASLSTFDIIAVIIWVPIYDKAIVPIARKFTNKVRGFSELQRMGIGLLLSIICMSSAALVESKRLQIAKEFDLIKENISVPFSILWQIPQYFLLGAAEVFTFVGQHEFFYEQAPDGMRSFCSALALLTNSVGNYLSSLILTIVDYITTEDGKCGWITNNLNEGHLDYFFWLLAGLSLLNMLVYIFYARQYKQKKVCHLSLP 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01208 1094 Gene3D MFS general substrate transporter like domains 721 1089 IPR036259 -
Car06g01208 1094 PANTHER PROTEIN NRT1/ PTR FAMILY 8.3 579 720 - -
Car06g01208 1094 PANTHER PROTEIN NRT1/ PTR FAMILY 8.3 722 1086 - -
Car06g01208 1094 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 579 720 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car06g01208 1094 SUPERFAMILY MFS general substrate transporter 587 1086 IPR036259 -
Car06g01208 1094 PANTHER PROTEIN NRT1/ PTR FAMILY 8.3 34 539 - -
Car06g01208 1094 Gene3D MFS general substrate transporter like domains 561 720 IPR036259 -
Car06g01208 1094 Gene3D MFS general substrate transporter like domains 19 545 IPR036259 -
Car06g01208 1094 Pfam POT family 322 502 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car06g01208 1094 Pfam POT family 657 720 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car06g01208 1094 Pfam POT family 722 1049 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car06g01208 1094 SUPERFAMILY MFS general substrate transporter 40 539 IPR036259 -
Car06g01208 1094 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 104 128 IPR018456 GO:0006857|GO:0016020|GO:0022857
Car06g01208 1094 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 34 539 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car06g01208 1094 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 722 1086 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01208 Car-Chr6 11890671 11900106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01208 1 541 Organic Solute Cotransporters AT2G02040 60.855 0.0 739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01208 06 11890671 11900106 Car06g01208 06 11890671 11900106 ECH