Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01201 ATGGAAAACAACCCAGTTCAGCTTTTGCCTCATCTCACTATAACACTTGTTCTCATGATGATGAAGATGATGGTTTTGTTTCCAATTAGTACTGAAGCAGTTGCATCAGTTTCTTCTATCAAAACTGATGCAAAAGCTCTTCTCATGTTCAAAAAGATGATTCAGAAGGACCCAAATGGAGTATTATCAGGTTGGAATCTAAATAAGAATCCATGCAGCTGGTATGGTGTCACTTGCACCTTTGGAAGAGTCACTGCCCTTGATGTTAGTGGAAACAGTGATCTTTCTGCTGGAACTATTTCCCTTGAACCTTTATCTTCTTTAGATATGTTATCTGCTTTGAAACTTTCTCTCAATTCATTTTCTGTAAATTCCACTTCTTTGCTTCAGTTACCATTTAGTTTGACACAACTTGATCTATCTTTTGGTAAAGTTTTAGGTCCTGTACCTGATAACTTGTTCTCCAAGTGTCCTAATCTTGTTGTCGTGAATCTTTCTTACAACAACTTGACAGGTTCAATTTTTTCTGGTTTGAGAATTGAGTGCAAATCTCTGTTGCAGCTTGATTTATCAGGAAACCATTTATCAGACTCAATTCCAATCTCTTTATCAAACTGCACCAGCCTTAAGAGTTTGAATTTAGCAAACAATTTCATTTCAGGTTCAATTCCATCTGGTTTCTCTTCTTGCACTTGGCTGCAACTTCTTGATTTATCAAACAACAACATGACAGAGTTATCAGAGTCAGTGCTTCAGAATCTTGGATCATTGCAGGAACTTAGGTTGGGAAATAATGCTATAAATGGAATATTTCCATCTTCAATATCTTCATGCAAAAAATTGAGGATTGTTGATTTCAGCTCAAACAAGATTTATGGATCTATCCCTAGAGATTTGTGTCCAGGTGCAGCCTCACTTGAGGAGCTGAGAATGCCTGATAATCTCATAACAGGTGAAATTCCAGCTGAACTTTCAATGTGTTCACAATTGAAGACTATTGATTTTAGTTTGAACTATTTGAATGGTTCAATCCCTGATGAGCTTGGTGAGCTTGAGAATCTTGAGGAGTTAATAGCATGGTTCAATGGTTTGGAAGGAAAGATTCCACCAAAGTTGGGACAATGCAAGAATCTTAAGGATCTCATATTGAATAACAATCACCTTAGTGGTGGAATTCCAATTGAGTTGTTCAATTGCAGCAATCTGGAATGGATATCATTGACAAGCAATGAACTCACCGGTGAAATACCGCGAGAGTTCGGCCTTTTGACACGGTTGGCAGTGTTGCAGCTAGGAAACAATAGCTTTACAGGTGAGATACCGTCAGAGCTAGCAAATTGCAACAGTTTGGTTTGGTTGGACTTGAACAGCAACAAGCTGACAGGAGAGATCCCTCCAAGACTTGGCAGGCAACAAGGAGCGAAATCATTATTCGGTATTCTTTCAGGAAACACGTTGGTTTTTGTAAGAAATATCGGAAACTCGTGTAAAGGAGTTGGAGGTTTGTTAGAATTCTATGGAATCCGATCCGAGAGGCTTTCACAGGTACCAACATTGAGGACTTGTGATTTCACAAGACTCTATTCTGGTCCTGTCCTCAGCTTGTTTACCAAGTATCAGACTTTGGAGTACCTTGATCTTTCCTACAATCAGCTCCGCGGAAAAATACCAGATGAATTCGGAGATATGGTGGCCTTACAGGTTCTTGAATTATCTCACAATAAATTGTCAGGAGAAATCCCTTCATCCCTTGGCCAGCTCAAAAATTTGGGAGTTTTTGATGCATCACATAACAGATTGCAGGGTCATATACCAGACTCATTCTCAAACCTATCATTCTTAGTGCAAATAGATCTATCTTACAATGAGTTAACAGGTCAAATTCCATCTAGGGGACAGTTAAGTACACTTCCAGCCACTCAGTATGCAAACAATCCGGGTCTCTGCGGTGTTCCATTGCCTGATTGCAAGAATGATAACAGCCAATCCACATCGAATCCGAGTGATGATGTTAGCACAGGAAGCCATAGAAGATCAGTTGCGTCATGGACAAACAACATTGTCATGGGAATTCTCATATCTGTGGCTTCTGTATGCATCTTAATTGTGTGGGCGATTGCAATGCGTGTAAGGAGAAAAGAGGCTGATGAAGTCAAGATGCTTAATAGATTGCAAGCATGCCATGCTGCTACAACATGGAAAATTGACAAAGAGAAAGAGCCATTAAGCATTAATGTAGCAACATTTCAAAGGCAGCTAAGGAAACTCAAATTCTCACAGTTGATTGAAGCAACCAATGGCTTCTCAGCAGAAAGTCTCATTGGTTGTGGTGGTTTTGGTGAAGTGTTCAAGGCCACACTCAAAGACGGATCATGTGTCGCGATAAAGAAGCTCATTCGATTAAGTTGCCAAGGTGATAGAGAGTTCATGGCTGAGATGGAAACCTTAGGAAAAATCAAACATAGAAATCTTGTCCCTTTATTAGGATACTGCAAAGTTGGAGAAGAAAGACTACTTGTTTACGAATACATGGAGTATGGAAGCCTAGAAGAGATGCTCCACAGAAGAATAAAAACACGCGACCGAAGAATTTTAACATGGAAAGAAAGAAAAAAGATTGCAAGAGGTGCTGCTAAAGGGCTTTGTTTTTTGCATCACAATTGCATACCTCACATAATTCACAGAGACATGAAATCAAGCAATGTGCTACTTGACAATGAAATGGAATCAAGGGTCTCGGATTTCGGAATGGCTAGACTAATAAGTGCACTTGATACACACCTTAGTGTAAGCACATTAGCAGGAACACCTGGTTATGTTCCACCAGAATATTACCAAAGTTTCAGGTGCACTGCAAAAGGAGATGTTTACTCATTTGGTGTTGTAATGTTGGAACTGATTAGTGGAAAACGGCCTACTGATAAGGAAGATTTTGGTGACACAAATTTGGTTGGTTGGGCTAAGATTAAGGTACGTGAAGGGAAACAAATGGAAGTGATTGATACTGATTTGCTTTTGGAAACTCAACAAGGAACAAATGAAGGTGAAGTCAAAGAAGTTAAAGAAATGATAAGATATTTGGAAGTTACTTTGCAGTGTGTTGATGATTTGCCTTCTAAAAGGCCGAACATGTTGCAGGTTGTGGCTATGCTTAGAGAACTTATACCTGAATCAAATGATGGAAGTAGCAACAGTGCTTAA 3201 0.3936 MENNPVQLLPHLTITLVLMMMKMMVLFPISTEAVASVSSIKTDAKALLMFKKMIQKDPNGVLSGWNLNKNPCSWYGVTCTFGRVTALDVSGNSDLSAGTISLEPLSSLDMLSALKLSLNSFSVNSTSLLQLPFSLTQLDLSFGKVLGPVPDNLFSKCPNLVVVNLSYNNLTGSIFSGLRIECKSLLQLDLSGNHLSDSIPISLSNCTSLKSLNLANNFISGSIPSGFSSCTWLQLLDLSNNNMTELSESVLQNLGSLQELRLGNNAINGIFPSSISSCKKLRIVDFSSNKIYGSIPRDLCPGAASLEELRMPDNLITGEIPAELSMCSQLKTIDFSLNYLNGSIPDELGELENLEELIAWFNGLEGKIPPKLGQCKNLKDLILNNNHLSGGIPIELFNCSNLEWISLTSNELTGEIPREFGLLTRLAVLQLGNNSFTGEIPSELANCNSLVWLDLNSNKLTGEIPPRLGRQQGAKSLFGILSGNTLVFVRNIGNSCKGVGGLLEFYGIRSERLSQVPTLRTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNQLRGKIPDEFGDMVALQVLELSHNKLSGEIPSSLGQLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSYNELTGQIPSRGQLSTLPATQYANNPGLCGVPLPDCKNDNSQSTSNPSDDVSTGSHRRSVASWTNNIVMGILISVASVCILIVWAIAMRVRRKEADEVKMLNRLQACHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAESLIGCGGFGEVFKATLKDGSCVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHRRIKTRDRRILTWKERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDNEMESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELISGKRPTDKEDFGDTNLVGWAKIKVREGKQMEVIDTDLLLETQQGTNEGEVKEVKEMIRYLEVTLQCVDDLPSKRPNMLQVVAMLRELIPESNDGSSNSA 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01201 1066 Gene3D - 481 537 - -
Car06g01201 1066 SUPERFAMILY L domain-like 42 300 - -
Car06g01201 1066 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Car06g01201 1066 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 212 1055 - -
Car06g01201 1066 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 30 224 - -
Car06g01201 1066 MobiDBLite consensus disorder prediction 656 676 - -
Car06g01201 1066 Gene3D Transferase(Phosphotransferase) domain 1 844 1065 - -
Car06g01201 1066 Gene3D Phosphorylase Kinase; domain 1 728 843 - -
Car06g01201 1066 ProSitePatterns Protein kinases ATP-binding region signature. 774 797 IPR017441 GO:0005524
Car06g01201 1066 SMART serkin_6 768 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01201 1066 ProSiteProfiles Protein kinase domain profile. 768 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01201 1066 Pfam Leucine rich repeat 535 576 IPR001611 GO:0005515
Car06g01201 1066 Pfam Leucine rich repeat 134 195 IPR001611 GO:0005515
Car06g01201 1066 Pfam Leucine rich repeat 400 460 IPR001611 GO:0005515
Car06g01201 1066 Pfam Leucine rich repeat 208 267 IPR001611 GO:0005515
Car06g01201 1066 SMART LRR_typ_2 254 277 IPR003591 -
Car06g01201 1066 SMART LRR_typ_2 449 471 IPR003591 -
Car06g01201 1066 SMART LRR_typ_2 182 206 IPR003591 -
Car06g01201 1066 SMART LRR_typ_2 376 399 IPR003591 -
Car06g01201 1066 SMART LRR_typ_2 233 253 IPR003591 -
Car06g01201 1066 SMART LRR_typ_2 207 230 IPR003591 -
Car06g01201 1066 SMART LRR_typ_2 351 375 IPR003591 -
Car06g01201 1066 SMART LRR_typ_2 423 447 IPR003591 -
Car06g01201 1066 SMART LRR_typ_2 563 587 IPR003591 -
Car06g01201 1066 SUPERFAMILY Protein kinase-like (PK-like) 749 1051 IPR011009 -
Car06g01201 1066 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 212 1055 - -
Car06g01201 1066 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 30 224 - -
Car06g01201 1066 Pfam Brassinosteroid receptor island domain 478 536 IPR045381 -
Car06g01201 1066 ProSitePatterns Serine/Threonine protein kinases active-site signature. 892 904 IPR008271 GO:0004672|GO:0006468
Car06g01201 1066 SUPERFAMILY L domain-like 225 656 - -
Car06g01201 1066 Gene3D Ribonuclease Inhibitor 66 656 IPR032675 -
Car06g01201 1066 PRINTS Leucine-rich repeat signature 542 555 - -
Car06g01201 1066 PRINTS Leucine-rich repeat signature 563 576 - -
Car06g01201 1066 Pfam Protein tyrosine and serine/threonine kinase 771 1051 IPR001245 GO:0004672|GO:0006468
Car06g01201 1066 MobiDBLite consensus disorder prediction 653 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01201 Car-Chr6 11808661 11812083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01201 123 658 Receptor kinase-like Gene Family AT1G55610 29.116 2.15e-37 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Car06g01201 PK_Tyr_Ser-Thr 6.4e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01201 06 11808661 11812083 Car06g01201 06 11808661 11812083 ECH