Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01173 atgaatgaggcaaagttgttggcacgtgtgcagcatcggaatgtggtgaatttgttgggttattgtgttcatggaacagagaagctacttgtttatgagtatgtgcctcatgagagcctcgacaagcttctattcAAATCTGAGAAGAGAAAGCAGCtagattggaaacgtaggtttggaataatcacaggcgtggcaaagggattgctttatctccacgaagactcccacaattgcattatccatcgtgacattaaggcaagtaacatactgcttgatgaaaaatggacggccaagattgcagatttcggaatggcCCGCCTCTTCCCCGAAGATCAAACCCAAGTCAACACACGCGTGGCTGGAACCAATGGATATATGGCTCCCGAGTATATGATGCATGGAAAACTATCTGTCAAGGCTGATGTGTTTAGCTATGGAGTTTTGGTATTGGAGTTGATCACAGGTCAACGAAATACTTCCTTTAATTTGGAAGTGGAGGGTCTTACTCTCCTTGATTGGGCATACAAAATGTACAAGAAAAGGAAGAGCTTAGAAATTGTAGATTCTACATTAGCATCTACAGTTGTAACAGAACAAGTAGGTATGTGCATTCAGCTGGCTCTACTATGCACTCAAGGAGATCCACAACTACGTCCAACAATGAGACGTATCGTAGTGATGCTTTCAAGGAAATCACCACAAAGCCACATGGAAGAACCAACAAGACCAGGAATACCAGGTAGCAGATATAGAAGACCTCCTAGGTACTCTGCTTTGTCTTCCACAGTTGGTACCTCTGGTTCTCACTCTTCTGATTCAAGCAACACTCTTACTGTTACTGCCACGATCACTAGTAAAAGTTCAGCTACTGCAGAGTTAGACCTAAGAGGGAAACGTCCAATGCTGGATTAG 915 0.294 MNEAKLLARVQHRNVVNLLGYCVHGTEKLLVYEYVPHESLDKLLFKSEKRKQLDWKRRFGIITGVAKGLLYLHEDSHNCIIHRDIKASNILLDEKWTAKIADFGMARLFPEDQTQVNTRVAGTNGYMAPEYMMHGKLSVKADVFSYGVLVLELITGQRNTSFNLEVEGLTLLDWAYKMYKKRKSLEIVDSTLASTVVTEQVGMCIQLALLCTQGDPQLRPTMRRIVVMLSRKSPQSHMEEPTRPGIPGSRYRRPPRYSALSSTVGTSGSHSSDSSNTLTVTATITSKSSATAELDLRGKRPMLD 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01173 304 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 276 - -
Car06g01173 304 ProSiteProfiles Protein kinase domain profile. 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01173 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672|GO:0006468
Car06g01173 304 MobiDBLite consensus disorder prediction 285 304 - -
Car06g01173 304 Gene3D Transferase(Phosphotransferase) domain 1 35 243 - -
Car06g01173 304 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Car06g01173 304 Pfam Protein tyrosine and serine/threonine kinase 1 228 IPR001245 GO:0004672|GO:0006468
Car06g01173 304 SMART serkin_6 1 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01173 304 MobiDBLite consensus disorder prediction 259 277 - -
Car06g01173 304 PIRSF TyrPK_CSF1-R 1 53 - -
Car06g01173 304 PIRSF TyrPK_CSF1-R 36 296 - -
Car06g01173 304 SUPERFAMILY Protein kinase-like (PK-like) 1 237 IPR011009 -
Car06g01173 304 MobiDBLite consensus disorder prediction 231 277 - -
Car06g01173 304 PANTHER RECEPTOR-LIKE KINASE 1 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01173 Car-Chr6 11554959 11559403 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01173 2 249 Receptor kinase-like Gene Family AT4G11490 50.192 1.24e-86 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car06g01173 PK_Tyr_Ser-Thr 1.6e-42 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01173 06 11554959 11559403 Car06g01173 06 11554959 11559403 ECH