Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01172 ATGGCTGCTAACAAATTTGCAACCATGTTACACAGAAACACCAACAAAATCACCCTTGTTCTAGTCTATGCAATCCTTGAATGGATTCTCATCATTCTTCTCCTTCTAAATTCACTTTTTTCTTATTTGATCATAAAGTTTGCTGATTATTTTGGCCTCAAAAGACCCTGCATGTGGTGTACAAGAATTGATCATATCATTGAGTCTGGAAAAAGTAACATGAAAAACCCTTGTAGAGATCTTGTGTGTGAAGCTCATGCTGTTGAGATTTCAAAATTAGGGTTTTGTTCAAATCATCACAAACTTGCTGAATCAGATAATATGTGTGAGGATTGTTCATCTTCTTCAAAACAAAAGCATGTTGACTTGTCTCAAAGTTTTGGTTTTTTTCCATGGATGAAGAAAATAGGAATGATTGAAGGTGATGATGAAAAGGTAATTGAAAAAGTTGAGGAGGGTTTGAAATGTTCATGCTGTGGTGTTAACTTTGATAGCAGATTCTACCCTCCTTGTATTTTGATTAATCCTTCTATGAACATTTTGGATTATGAACAGAATCAGAATATGATCAAAGAAGAGGTTGGTGATGGTAATCATGTGTCAGATCACAGCAGATCAGATTTTGTACTTGATCATCATGAATATCAACAGAATACTGAAGAAAACAGTGGAAAAATTCATATGGTGTTTGAGGTTGAAAAGGATTCATGTATAAAAGAAGAGGAGGCAGAGGAGACTTGTGCTTGTTCTGTTTGTGATGGTGTCAAAGAAACCATGGTTGATGATATTTTCAAGGTGGAATTTGGTGTTGGGAAAGAAAAAAATGAAACCTTGGAAGATGAAGCCTTGAAATTGAATTTTCCAAAGGCTAAGGATGATGATGTTGAAGTTGAGAAAAGTGAGGAAATTCAACCTAAACATCTTGATTTTTTCATTCATGGTGATGATTGCAGTTTGATTCCTGTTGAAATGGTTGATTCCACTGCCACAGAAAATGAAAATCAAAGTAGATTTAATAAGGTTGGGGATGAACGGTTTAATGGCAGTGAAGATTTTATTCTGGATTTTGGCATGAGTACTACTGATGCAGAAGCTGAACCAGTTATTGCCAATTGGCACATTTCTGGTGACATTGTGGCAGAATTTTCATGTGAAGAGGATAAAAATGTCTCCAAAGTAGAAGAAAATTTGGAGCAGTGTTATCAAGATTTGAGATTTGCTCAAAAAGATGAAGACTTGACCAAGGATGATAATGTTGAAACAAACATGGAAAAAATGATGAATGGAGATGGAGAATTATGTTCAAATGTTTCTCTAGCTTCTGAAGATGATGCATCACAAACTCACGGTGAGGAATTTGAAGCAGAAGTATCAATTGGGACTGAAATTCCTGATCAGGAACAAGTGGATGAGTATGAAGACCAAGATATACATTTTGATACAAATCAAAGAATGCAAGAAGATTCATCTACTAGCTCAGTCAGAATTTATGTTCAACATGATAGTGGTGATGAAAAAGGTGAAGAGTTTGTAGAATTTAAAAACATGTCACTTGAAGTGAGAATGCCAACAGCAAGTAACCATTTTCCATCATCATTGGAGCTTAATGAGAATGAGGAAGAAAAAGTTCCCGACACACCCAATTCTCTAGATAGTCTTCATCAACTACACAAAAAATTACTTTTACTTGAGAGGAAAGAGTCGGGAACGGAAGAATCGTTGGATGGAAGTGTAATGAGCGACATAGAATGCGGCGAGGTGACATTCGAGAATTTAAAATCAGCGCTGAAATCCGAAAGGAAGGCATTGAAAACTCTCTATGCAGAACTAGAAGAAGAAAGAAATGCATCTGCTGTAGCAGCCAATCAAACAATGGCAATGATTAATAGGCTTCAAGAAGAGAAAGCGGCAATGCAGATGGAAGCTTTGCATTATCAGCGAATGATGGACGAACAATCCGAGTACGATCAAGAGGCTTTGCAGCTTTTGAATGAGCTTATGTTGAAGAGGGAGAAAGAGAAGCAAGAGGTGGAAAAGGAGCTTGAAGTGTACAGAAAAAAGGTTCATGAATATGAGGTAAGAGAAAAGATGATGATGATATCCAGAAGAGATGGTAGTATAAGAAGCAGAACTACTTCATCTCCTTCTTGTAGCAATGCTGAGGATAGTGATGGATTGTCCATTGATTTCAATCAACAAGAAGCAAAGGAAGAAAATGGTTTTTGCAGCCATCAGGAATGTAGCAACCAGAACACTCCTGTTGATGCTGTCTTACATTTGGAGGAATCATTGGCAAATTTTGAGGAAGAGAGGTTATCAATACTAGAACAGCTGAAAGTGTTGGAAGAAAAGCTAATTATATTGAATTATGAAGAACAACACTGCTTTGAATTTGATGATACTACTACATCAATAGAACATCTTTGTGAAGAGAATGGGAATGGATATCATGATGATGACGAAGATGATCAACAAGGCCATGTAAATGGATTTCAAAATGGTAATGGAAAGCAGCACCAAGGGAGGAAAATCATGGCCGCTAAAGCAAAGAGGCTTCTTCCACTTTTTGATGCAATGAGTACAGAAGCAGAAGATGTAGAGTTaagtggagatgaaaatgaaaatgaaaacgaaTTAGAATTTTCGAAGTTGCAAAATAGTTCAACTCAAAAGGCCAATTTGGATAAGAAAAAGGTTGGTTTAGAAGAGGAGGTGGACCATGTTTATGAAAGACTACAAGTTCTTGAGGCAGATAGAGAGTTTCTAAAGCACTGTATCAGCTCCTTGAGAAAAGGCGATAAAGGGTTAGATCTTCTTCAAGAAATTTTACAACATCTACGTGATTTGAGGAATGTGGAACTCAGAGTCAGAAACATGGGAGATCTTGCAGTATAA 2895 0.3637 MAANKFATMLHRNTNKITLVLVYAILEWILIILLLLNSLFSYLIIKFADYFGLKRPCMWCTRIDHIIESGKSNMKNPCRDLVCEAHAVEISKLGFCSNHHKLAESDNMCEDCSSSSKQKHVDLSQSFGFFPWMKKIGMIEGDDEKVIEKVEEGLKCSCCGVNFDSRFYPPCILINPSMNILDYEQNQNMIKEEVGDGNHVSDHSRSDFVLDHHEYQQNTEENSGKIHMVFEVEKDSCIKEEEAEETCACSVCDGVKETMVDDIFKVEFGVGKEKNETLEDEALKLNFPKAKDDDVEVEKSEEIQPKHLDFFIHGDDCSLIPVEMVDSTATENENQSRFNKVGDERFNGSEDFILDFGMSTTDAEAEPVIANWHISGDIVAEFSCEEDKNVSKVEENLEQCYQDLRFAQKDEDLTKDDNVETNMEKMMNGDGELCSNVSLASEDDASQTHGEEFEAEVSIGTEIPDQEQVDEYEDQDIHFDTNQRMQEDSSTSSVRIYVQHDSGDEKGEEFVEFKNMSLEVRMPTASNHFPSSLELNENEEEKVPDTPNSLDSLHQLHKKLLLLERKESGTEESLDGSVMSDIECGEVTFENLKSALKSERKALKTLYAELEEERNASAVAANQTMAMINRLQEEKAAMQMEALHYQRMMDEQSEYDQEALQLLNELMLKREKEKQEVEKELEVYRKKVHEYEVREKMMMISRRDGSIRSRTTSSPSCSNAEDSDGLSIDFNQQEAKEENGFCSHQECSNQNTPVDAVLHLEESLANFEEERLSILEQLKVLEEKLIILNYEEQHCFEFDDTTTSIEHLCEENGNGYHDDDEDDQQGHVNGFQNGNGKQHQGRKIMAAKAKRLLPLFDAMSTEAEDVELSGDENENENELEFSKLQNSSTQKANLDKKKVGLEEEVDHVYERLQVLEADREFLKHCISSLRKGDKGLDLLQEILQHLRDLRNVELRVRNMGDLAV 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01172 964 Coils Coil 884 918 - -
Car06g01172 964 Coils Coil 390 410 - -
Car06g01172 964 MobiDBLite consensus disorder prediction 705 724 - -
Car06g01172 964 Coils Coil 764 784 - -
Car06g01172 964 MobiDBLite consensus disorder prediction 704 724 - -
Car06g01172 964 PANTHER MYOSIN-BINDING PROTEIN 3 1 961 - -
Car06g01172 964 Coils Coil 621 648 - -
Car06g01172 964 Coils Coil 589 616 - -
Car06g01172 964 PANTHER MYOSIN-BINDING PROTEIN 2 1 961 IPR039306 GO:0017022
Car06g01172 964 Coils Coil 660 694 - -
Car06g01172 964 MobiDBLite consensus disorder prediction 811 843 - -
Car06g01172 964 MobiDBLite consensus disorder prediction 811 826 - -
Car06g01172 964 Pfam Zein-binding 591 681 IPR007656 -
Car06g01172 964 ProSiteProfiles GTD-binding domain profile. 587 685 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01172 Car-Chr6 11545380 11550126 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01172 06 11545380 11550126 Car06g01172 06 11545380 11550126 ECH