Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01171 ATGGGTACGCTTCAATCTTGGCGAAGAGCTTACGGGGCCATCAAAGACACCACCAAAGTTGGTCTCGCCCATGTCAATAGCGATTACGCGGATTTGGATGTTGCCATAGTCAAAGCCACTAACCACGTCGAGTGTCCACCCAAAGAGAGACACCTTAGAAAAATTCTGTTTGCAACTTCTGCTGTTCGACCACGGGCTGATGTGGCATATTGTATTCACGCACTTTCCCGACGCCTTGCCAAAACCCGAAATTGGACGGTGGCATTAAAAACACTGATAGTCATCCACAGGTTACTGAGGGAGGGTGATCCAACTCTTAGAGAGGAAATTCTGAATTTCTCACAAAGAGGACGGATTCTCCAACTTTCAAATTTTAAGGATGATTCTAGTCCTATCGCATGGGATTGTTCTGCCTGGGTACGTACCTATGCATTATTTTTGGAAGAAAGACTTGAATGCTTTCGGATTCTGAAATATGATATTGAAGCAGAGCGTCTACCCAAACCTGCCCAAGGGCAGGAGAAGGGATACAGCAAGACCAGGGATTTAGATAGTGAGGAGCTATTGGAGCATTTGCCTGCTTTGCAGCAGCTGCTATATCGACTTGTTGGCTGCCGGCCAGAAGGAGCAGCTGTTAGCAATTATGTGATACAATATGCTCTTGCTCTGGTACTGAAAGAGAGCTTTAAGATATATTGCGCTATTAACGATGGCATTATCAATCTTGTTGACAAGTTTTTTGAGATGCCAAGACATGAAGCTATTAAAGCCCTTGAAGCTTATAAACGTGCGGGTCAGCAGGCAGCAAGTCTTTCCGATTTCTATGAAGTTTGCAAAGGATTGGAACTTGCTAGGAATTTTCAGTTTCCTGTCTTAAGAGAGCCTCCGCAATCTTTTCTTACAACTATGGAGGAGTACATTAAGGAGGCACCCCGAGTGGTTACAGTTCCAAATGAACCTATGCTTCAGTTGACTTACAGACCAGAAGAATTTCTTGCAATTGAAGACACCAAAGTGTCCGAAGAGCATGAGCCATCAGAACCTATTGATAATAATGTTGTTGTCCCCAATTCTGAGcctgcacctcctcctcctcctcctcccccATTCAACAACAATTTTGAGACTGGAGACTTACTGGGATTGAATGACCTGGAGCCTAATGCATCATCCATAGAGGAAAGAAATGCTCTGGCACTGGCCATAGTCCCCACTGAAACTGGCACTGCATCAGCTTTTAACTCTAGTGCTGCTCAAACAAAAGATTTCGACCCTACTGGATGGGAGCTTGCCCTTGTCAGCACTCCAAGTACTGATATTTCTTCAGTTAATGAGAGACAATTGGCTGGTGGATTGGACTCTCTCACTCTTAACAGCTTATATGATGAAGGAGCATACAGAGCCGCACAACAACCGGTTTATGGAACACCAGCCCCAAATCCATTCGAAGTGCATGATCCATTTGCTATATCAAGCAGCATTGCTCCCTCGGCCGCTGTCCAAATGGCAGCAATGCAACAGCAAGCAAATCCATTCGGTCCTTACCAACAGTTTCAGGCTCAGCCTCAGCAGCAGCAGCATATGTTGATGAACCCAGCAAATCCCTTTGCGGATTCAGGATTTGGGGCTTTTCATGCAACTCCCGTTTCTCACCCACAGAATAACAATCCATTTGGAAGCACAGGCTTGTTGTAA 1695 0.4425 MGTLQSWRRAYGAIKDTTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKILFATSAVRPRADVAYCIHALSRRLAKTRNWTVALKTLIVIHRLLREGDPTLREEILNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPKPAQGQEKGYSKTRDLDSEELLEHLPALQQLLYRLVGCRPEGAAVSNYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEAYKRAGQQAASLSDFYEVCKGLELARNFQFPVLREPPQSFLTTMEEYIKEAPRVVTVPNEPMLQLTYRPEEFLAIEDTKVSEEHEPSEPIDNNVVVPNSEPAPPPPPPPPFNNNFETGDLLGLNDLEPNASSIEERNALALAIVPTETGTASAFNSSAAQTKDFDPTGWELALVSTPSTDISSVNERQLAGGLDSLTLNSLYDEGAYRAAQQPVYGTPAPNPFEVHDPFAISSSIAPSAAVQMAAMQQQANPFGPYQQFQAQPQQQQHMLMNPANPFADSGFGAFHATPVSHPQNNNPFGSTGLL 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01171 564 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Car06g01171 564 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Car06g01171 564 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Car06g01171 564 Gene3D - 7 161 IPR008942 -
Car06g01171 564 MobiDBLite consensus disorder prediction 548 564 - -
Car06g01171 564 PANTHER OS05G0549000 PROTEIN 1 547 - -
Car06g01171 564 SMART enth_2 30 161 IPR013809 -
Car06g01171 564 SUPERFAMILY GAT-like domain 179 309 - -
Car06g01171 564 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 547 IPR045192 GO:0048268|GO:0072583
Car06g01171 564 Gene3D ANTH domain 173 323 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Car06g01171 564 MobiDBLite consensus disorder prediction 540 564 - -
Car06g01171 564 MobiDBLite consensus disorder prediction 338 370 - -
Car06g01171 564 CDD ANTH_N 32 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01171 Car-Chr6 11515431 11521872 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01171 06 11515431 11521872 Car06g01171 06 11515431 11521872 ECH