Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00186 ATGATAGAAAAGAAAAAGATGACAATTGAGAGAAAACAAGTGATAGCAGAAGTAAAGAAGCAACTATGGTTAGCAGTTCCTATGTCATGCATTGGACTCCTACAATACAGTCTTCAAACCATTTCTGTTATGTTTGTTGGACATGTTGGTACTCTCCCTTTATCTGGGGCTTCCATGGCCACTTCTTTTGCCTCTCTCACTGGCTTCAACCTACTGATGGGAATTGCTAGTGCACTAGACACATTTTGTGGTCAATCAAATGGAGCAGGACAGTTCCATATGCTTGGAATATACATGCAAAGATCAATGCTTGTTGTTTCAATTGTGAGTGTATTCCTTAGTATCATATGGGCAAACACAGAATCAATTCTAGTTTTTATGCACCAAGACAAGGCTATATCAAAAGAAGCTGGTTCATATGCATTTTTCATGATACCAAGTTTGTTTGCATATGGTCTTCTTCAATGCATTCTCAAGTTCTTGCAAACACAAAACATTGTCCTCCCAATGGTTTTAACCTCTGGAATCACAGCTTTGATTCACATACTTTTGTGTTGGGTTTTGGTTTTTCAAATTAAGCTTGGAAGTAAAGGGGCAGCATTGTCAAATTCTATATCTTATTGGGTTAATGTGTTATTGATTTCTCTTTATGTGAAATTTTCTTCTTCTTGTAAACAAACATGGACAGGATTTTCAAAGAGAGCACTGCATAGTCTCTTTGATTTCCTTAAACTAGCTGTTCCTTCAGCTCTCATGATCTGCTTGAAAGTGTGGACATTTGAACTAATGGTTCTCATGTCTGGTCTTCTTCCTAATCCAGTATTAGAAACTTCAGTGCTTTCAATATGCCTTAATACATTCGGTCTAGCTTGGATGATACCTTTTGGATGCAGTGCTGCAGTAAGCATACGGGTGTCGAATGAAGTGGGGGGTGGAAATCCAGAGGGTGCAAGTCTAGCAGTTCGAATGGCATTATCCTTAGCATTCATTGAAGGTGCATTTTTAGTATCAACTATGATTCTATTGAGGAATGTGTGGGGCCATCTTTATAGTGATGACAAACAAGTAATCAAATACATCTCATACATGATGCCAATTTTGGCTCTTTCTAGTTTCCTTGATGCCATTCAAAGTACACTTTCAGGTGTTCTTGCAGGATGTGGGTGGCAGAAGATTGGTGCCTATGTGAATCTTGGTTCATTTTATATTGTAGGTGTACCATGTGCCGTTGCATTAGCCTTTTTTCTGCACATGCGTGACATGGGGCTGTGGTTAGGGATTATCTCTGCATTTATTGTGCAAATATTGTTGTACACTATTTTTACGATTCGTACTAACTGGGAGGAAGAAGCAGGGAAGGCTCAAAGCAGAGTTGAGCAATCCACCGTGACGCCAGCTACTACTCTCAGAGACAGCATATCATCTCAAAAACTTGAACAAATTCCCTAA 1449 0.3913 MIEKKKMTIERKQVIAEVKKQLWLAVPMSCIGLLQYSLQTISVMFVGHVGTLPLSGASMATSFASLTGFNLLMGIASALDTFCGQSNGAGQFHMLGIYMQRSMLVVSIVSVFLSIIWANTESILVFMHQDKAISKEAGSYAFFMIPSLFAYGLLQCILKFLQTQNIVLPMVLTSGITALIHILLCWVLVFQIKLGSKGAALSNSISYWVNVLLISLYVKFSSSCKQTWTGFSKRALHSLFDFLKLAVPSALMICLKVWTFELMVLMSGLLPNPVLETSVLSICLNTFGLAWMIPFGCSAAVSIRVSNEVGGGNPEGASLAVRMALSLAFIEGAFLVSTMILLRNVWGHLYSDDKQVIKYISYMMPILALSSFLDAIQSTLSGVLAGCGWQKIGAYVNLGSFYIVGVPCAVALAFFLHMRDMGLWLGIISAFIVQILLYTIFTIRTNWEEEAGKAQSRVEQSTVTPATTLRDSISSQKLEQIP 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00186 482 CDD MATE_eukaryotic 17 453 IPR045069 GO:0042910|GO:1990961
Car06g00186 482 TIGRFAM matE: MATE efflux family protein 33 424 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car06g00186 482 PANTHER PROTEIN DETOXIFICATION 10 459 - -
Car06g00186 482 Pfam MatE 27 187 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car06g00186 482 Pfam MatE 248 409 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car06g00186 482 PANTHER MULTIDRUG RESISTANCE PROTEIN 10 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00186 Car-Chr6 2055925 2058872 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01505 04 15247009 15251930 Car06g00186 06 2055925 2058872 ECH
Car06g00186 06 2055925 2058872 Car06g00186 06 2055925 2058872 ECH
Car08g01639 08 26138497 26141492 Car06g00186 06 2055925 2058872 PCT