Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00155 ATGGAGGGAGAGGGAAATAGTGGTAAGTCGCTGATGGAAGACCTGCTTGGTCTTTTAAGAATTCGCATCAAGCGTGGCGTCAATCTCGCCGTTCGTGATGTCAATACCAGCGATCCATATGTGGTTGTTAAGATGGGAAAGCAGAAACTCAAGACTCGTGTCATTAAAAAGGATATTAATCCTGAGTGGAATGAAGACCTTACATTATCTGTCACAGATCCTGTTCTTCCATTCATACTGACTGTGTATGACCATGACACATTTACCGCAGATGATAAAATGGGAGACGCTGAATTTGACTTGTCGCCATACATAGATGCTTTAAAGATGAACTTAGCAGACATCCCAAACGGTACTGTAATAACCAGAATACAACCGAGCAGACAAAACTGCTTGGCAGAGGAGAGTTGCATCACTTGTACCGATGGCAAAATTGTTCAAGATGTTGTCCTTAGATTGAGAAATGTCGAATGTGGTGAACTGGAAATTCAATTGCAATGGATTGATCTTCCTGGTTCCAAGGGTTTATGA 531 0.42 MEGEGNSGKSLMEDLLGLLRIRIKRGVNLAVRDVNTSDPYVVVKMGKQKLKTRVIKKDINPEWNEDLTLSVTDPVLPFILTVYDHDTFTADDKMGDAEFDLSPYIDALKMNLADIPNGTVITRIQPSRQNCLAEESCITCTDGKIVQDVVLRLRNVECGELEIQLQWIDLPGSKGL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00155 176 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 15 102 IPR035892 -
Car06g00155 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 8 175 - -
Car06g00155 176 SMART C2_3c 18 113 IPR000008 -
Car06g00155 176 CDD C2_ArfGAP 16 159 - -
Car06g00155 176 ProSiteProfiles C2 domain profile. 3 114 IPR000008 -
Car06g00155 176 Pfam C2 domain 17 103 IPR000008 -
Car06g00155 176 Gene3D C2 domain 13 174 IPR035892 -
Car06g00155 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 8 175 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00155 Car-Chr6 1836974 1838014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00155 49 176 C2H2 Transcription Factor Family AT1G70790 58.462 1.07e-50 158
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01623 08 25831745 25834069 Car06g00155 06 1836974 1838014 ECH
Car06g00057 06 714587 716795 Car06g00155 06 1836974 1838014 ECH
Car06g00155 06 1836974 1838014 Car06g00155 06 1836974 1838014 ECH
Car06g00155 06 1836974 1838014 Car08g01623 08 25831745 25834069 PCT