Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00065 ATGTTCATGGGTTGCTGCTTTAGTGCAAAGGTCAAAGCTGAGAGTCCTACACATAATGGTATGAATTCAAAGGTTGGTAGGAAAGAAGAGGATGTTTCAAGTGGTTTAAGTAGCAAGCTGTCCTCTTCATCTATGCTTCTAACTTCTAGGAGTGAGGGTGAGATATTGCAATCCAACAGTTTGAAGTGTTTCACTTTCAATGAGGTAAGAACTGCTACAAGGAACTTTCGTCCGGATAGTGTCGTCGGTGAAGGTGGATTTGGTTCTGTATTTAAGGGATGGATCGATGAGCGCACACTAGCCCCTACTAAACCAGGTACAGGTTTTGTCATTGCTGTTAAGAGGCTTAATCAAGAAAGCAATCAGGGACATAGTGAATGGTTGACAGAAATCAATTACCTAGGACAGCTGCATCATCCTAATCTTGTGAAACTGATTGGTTTTTGCTTAGAGGATGACTACCGGATTTTGGTATACGAATTTTTGCCCAAGGGAAGTTTGGATAATCATTTGTTTAGAAAATACTTTCAGCCACTCTCTTGGAAAATCCGTATGAAGATAGCTCTTGATGCTGCTAAGGGTCTTGCGTTTCTTCACAGTGATGAAGTCGAAGTGATATATCGAGACTTCAAAACTTCTAATATTTTGATTGATAATAACTATAATGCAAAACTCTCTGATTTCGGGTTGGCAAAAGATGGACCAGAAGGTGGTAAAAGCCATGTCTCTACAAGGATAATGGGCACCCCAGGCTATGCAGCTCCTGAGTATCTAGCCACAGGTCACCTAACCAAAAAGAGTGATGTATACAGCTTCGGTGTTGTTCTCTTGGAAATTATGTCAGGCAAACGCGCATTGGATAAAAATAGGCCGTCCGGGGAGCATATGTTAGTTGAATGGGCCAAGCCATTGCTCGTCAGCAGGCGCAAGATCTCTCAAGTCATGGATGCTCGTATAGAAGGTCAATACTCATCGCATGAAGCAATGAAAGTAGCACACATTGCAATTCAATGTCTGTCGGTAGAACAAAAATATAGACCAAACATAGATGTAGTGGTGAGATCGTTGGAACAACTTCAGGAATCCAATAGCACTGTCGGTGGAGTTGGAAGCTCTCAGTCTCAACATCAAACAACCATCAAAATAAATGGTCATAGCTCAAGTAGCAGTGGTTTAGAACAAAATGGAAAAAGCGTTGATGAATCTTTAAGTGGAGAAGGTACTTCTAATACGAGTTCATCTGCTTCTCCTCTTTATATCTAG 1263 0.4133 MFMGCCFSAKVKAESPTHNGMNSKVGRKEEDVSSGLSSKLSSSSMLLTSRSEGEILQSNSLKCFTFNEVRTATRNFRPDSVVGEGGFGSVFKGWIDERTLAPTKPGTGFVIAVKRLNQESNQGHSEWLTEINYLGQLHHPNLVKLIGFCLEDDYRILVYEFLPKGSLDNHLFRKYFQPLSWKIRMKIALDAAKGLAFLHSDEVEVIYRDFKTSNILIDNNYNAKLSDFGLAKDGPEGGKSHVSTRIMGTPGYAAPEYLATGHLTKKSDVYSFGVVLLEIMSGKRALDKNRPSGEHMLVEWAKPLLVSRRKISQVMDARIEGQYSSHEAMKVAHIAIQCLSVEQKYRPNIDVVVRSLEQLQESNSTVGGVGSSQSQHQTTIKINGHSSSSSGLEQNGKSVDESLSGEGTSNTSSSASPLYI 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00065 420 PANTHER OS01G0588500 PROTEIN-RELATED 26 388 - -
Car06g00065 420 CDD STKc_IRAK 82 359 - -
Car06g00065 420 PANTHER KINASE 1B 26 388 - -
Car06g00065 420 Pfam Protein tyrosine and serine/threonine kinase 80 355 IPR001245 GO:0004672|GO:0006468
Car06g00065 420 Gene3D Phosphorylase Kinase; domain 1 51 161 - -
Car06g00065 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Car06g00065 420 ProSitePatterns Protein kinases ATP-binding region signature. 82 114 IPR017441 GO:0005524
Car06g00065 420 Gene3D Transferase(Phosphotransferase) domain 1 162 382 - -
Car06g00065 420 ProSiteProfiles Protein kinase domain profile. 76 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00065 420 MobiDBLite consensus disorder prediction 363 420 - -
Car06g00065 420 SUPERFAMILY Protein kinase-like (PK-like) 55 357 IPR011009 -
Car06g00065 420 MobiDBLite consensus disorder prediction 15 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00065 Car-Chr6 833364 836555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00065 59 374 Receptor kinase-like Gene Family AT3G58690 45.846 1.58e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car06g00065 PK_Tyr_Ser-Thr 3e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00065 06 833364 836555 Car06g00065 06 833364 836555 ECH