Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00057 ATGTCAATGGAGAATTTGTTGGGATTGCTCAAAATTCATGTTCAAAGAGGTGTCAATCTTGCTATCAGGGATGTTGTGAGCAGTGATCCATATGTTGTCATCAAAATGGGAAAGCAGAAGCTGAAGACTAGGGTAGTGAAGAAGAATCTAAATCCTGAGTGGAATGAGGACTTGACTTTATCTATTTCAGATCCTCGTACTCCAATCAGTCTACATGTGTACGATAAGGACATGTTCAGCATGGATGACAAAATGGGGGATGCTGAGTTTGACATCGGTCCATTTGTTGAAGCGGTCAAGATGCGATTAGAAGGTCTCCCAAATGAAACTATAGTTACAAAGGTGCAACCTTGCAGAAAAAACTGTTTAGCAGAAGAGAGTCACATTGTTTTGAAGGATGGCAAATATTTCCAAAACATGGTTCTTAGACTAAGAAATGTTGAAAGTGGGGAAGTGGAGCTTCAATTGAATTGGATTGATATTCCTGGTTCAAAGGGTTTGTAG 504 0.3968 MSMENLLGLLKIHVQRGVNLAIRDVVSSDPYVVIKMGKQKLKTRVVKKNLNPEWNEDLTLSISDPRTPISLHVYDKDMFSMDDKMGDAEFDIGPFVEAVKMRLEGLPNETIVTKVQPCRKNCLAEESHIVLKDGKYFQNMVLRLRNVESGEVELQLNWIDIPGSKGL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00057 167 CDD C2_ArfGAP 7 150 - -
Car06g00057 167 SMART C2_3c 9 104 IPR000008 -
Car06g00057 167 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Car06g00057 167 Pfam C2 domain 9 94 IPR000008 -
Car06g00057 167 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 93 IPR035892 -
Car06g00057 167 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 166 IPR044562 -
Car06g00057 167 Gene3D C2 domain 4 165 IPR035892 -
Car06g00057 167 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 3 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00057 Car-Chr6 714587 716795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00057 40 167 C2H2 Transcription Factor Family AT1G70790 60.000 2.29e-49 154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00057 06 714587 716795 Car06g00057 06 714587 716795 ECH
Car06g00057 06 714587 716795 Car08g01623 08 25831745 25834069 ECH
Car06g00057 06 714587 716795 Car06g00155 06 1836974 1838014 ECH