Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00021 ATGTTCATCCATCCACAACAAACAAGTTTCATTGATTTTGTTTCCACAATGGTTCTCTCCAAGACCTCCTCCGAGTCCGATGTCTCTGTCCACTCAACCTTTGCTTCTCGTTATGTCAGAACTTCACTTCCAAGATTCAAGATGCCGGAGGAGTCGATACCAAAGGAGGCAGCATACCAAATAATAAACGATGAATTGATGCTGGATGGAAATCCaagactgaatcttgcatcatttgtgacaacatggatggaacctgaATGTGATAAACTCATCATGGCTTCCGTTAACAAGAATTATGTTGACATGGATGAATACCCTGTCACCACTGAACTCCAGAATCGATGTGTTAACATGATAGCTCATCTTTTTAATGCACCACTTGAAGAGACTGAGGCTGCAGTTGGTGTTGGCACTGTTGGCTCATCAGAAGCTATAATGTTAGCTGGATTGGCATTCAAAAGAAAGTGGCAGAACAAAAGAAAACAACAGGGAAAACCTTACGACAATCCTAACATTGTTACTGGAGCCAATGTTCAGGTTTGTTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGCTGAAAGAGGTGAAACTATGTGAAGGATACTATGTAATGGATCCTGAAAAGGCTGTGGAATTGGTGGATGAGAACACTATTTGTGTAGCTGCTATTCTTGGTTCGACATTAAATGGAGAGTTTGAAGATGTGAAACGCTTAAATGATCTCCTAGTTGAAAAGAATAGAGAAACTGGATGGGATACACCTATTCATGTGGATGCAGCTAGTGGTGGATTCATTGCTCCATTTATTTATCCAGAGCTTGAGTGGGATTTCCGTTTACCACTTGTGAAAAGCATCAATGTTAGTGGTCACAAATATGGTCTTGTCTATGCTGGTATTGGTTGGGCtatttggagaagcaaggaagatttgcctgatgaactcatctttcacatcaacTATCTTGGAGCTGATCAACCTACTTTTACACTCAACTTCTCCAAAGGTTCAAGCCAAGTTATTGCTCAATACTACCAACTAATTCGCCTTGGTTATGAGGGGTACAAAAATGTGATGGAAAATTGCAGAGACAACATGCTAGTACTAAAAGAAGGACTGGAAAAAACAGGACGCTTCGACATTGTGTCGAAAGACAATGGTGTTCCTTTAGTGGCCTTCACATTGAAGGACCACACACACTTTGATGAATTTCAAATATCGGACTTGTTGCGTCGCTTCGGATGGATAGTTCCGGCATACACAATGCCTCCAGATGCACAACACGTAACTGTGTTACGTGTTGTCATAAGGGAGGACTTTTCGAGGACATTAGCGGAGCGTCTTGTGGTGGATGTTGAGAAAGTGTTGCATGAGCTTGATTCACTTCCATCAAGGATGATAAATAGGAGCAGCAGCACTAGTGTTGCAGTTAATGAAATAGTTGTGAAAAATGACACTGATCAACTAGTGGCTGCTAAAAAGAGTGCTTTGGAGACACAAAGGGAAATCACTGCTGTTTGGAAGAAGTTTGTGTTGGAGAGGAAGAAGTTGAATGATAAGATGAATGGTGTTTGTTAA 1581 0.3884 MFIHPQQTSFIDFVSTMVLSKTSSESDVSVHSTFASRYVRTSLPRFKMPEESIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEETEAAVGVGTVGSSEAIMLAGLAFKRKWQNKRKQQGKPYDNPNIVTGANVQVCWEKFARYFEVELKEVKLCEGYYVMDPEKAVELVDENTICVAAILGSTLNGEFEDVKRLNDLLVEKNRETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWAIWRSKEDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKNVMENCRDNMLVLKEGLEKTGRFDIVSKDNGVPLVAFTLKDHTHFDEFQISDLLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVVDVEKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00021 526 Pfam Pyridoxal-dependent decarboxylase conserved domain 49 397 IPR002129 GO:0016830|GO:0019752|GO:0030170
Car06g00021 526 PANTHER GLUTAMATE DECARBOXYLASE 17 526 - -
Car06g00021 526 Gene3D - 17 81 - -
Car06g00021 526 Gene3D - 377 464 - -
Car06g00021 526 Gene3D - 82 376 IPR015421 GO:0003824
Car06g00021 526 SUPERFAMILY PLP-dependent transferases 31 460 IPR015424 -
Car06g00021 526 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 32 460 IPR010107 GO:0004351|GO:0006536|GO:0030170
Car06g00021 526 PANTHER GLUTAMATE DECARBOXYLASE 17 526 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00021 Car-Chr6 255212 263248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00021 17 526 Calmodulin-binding Proteins AT5G17330 83.137 0.0 889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00021 06 255212 263248 Car06g00021 06 255212 263248 ECH