Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03256 ATGACTCATTCACTTTTTCTCAATATTCTTTTTTTTCCACTTATTATTATTATCATAACCACCGTCACTCTTCCATCTCCGGCTGAATCCGGCAGTGGACAATGGCAACTCTTACAAAAAAACATCGGCATTGTAGGCATGCACATGCAGTTACTCCACAACGATCGTGTTGTCATTTTCGACCGTACAGATTTTGGCTTATCAAACTTATCTTTACCTAATGGTAGATGTCGCATTAATCCACAAGAACAAGTCGTTAAAACTGATTGCACTGCTCATTCTCTTGAATACGACGTCGTTTCCAACTCATTCCGACCACTCTTCGTTCAAACCAACGTTTGGTGTTCTTCAGGTTCCGTTTCCCCTGACGGTAAATTAATCCAAACCGGTGGTTTCAACGACGGTGATCGTACCGTTAGAATCTTCAATCCATGTTCTTCATGTGATTGGCAAGAATTCAATGCTTCACTTGCAGCTAGAAGATGGTATTCTACTAATCATAATCTTCCAGATGGAAGACAAATTATTATCGGTGGAAGAAGACAATTCAACTATGAATTTTATCCAAAAAAAGAATCAACAGCGAAAAACACTTACAGTTTACCTTTTCTCGTTCAAACAAACGACGCTGGTGCTGAGAACAATCTTTACCCTTTTGTTTTTCTCAATGTTGATGGAAACCTCTTCATCTTCGCAAATAACCGTGCTATTTTGTTTGATTATAACAGCAACAATGTTGTTAAAACATATCCGGTAATACCAGGTGGAGATCCTCGTAGTTATCCTAGTACTGGTTCCGCCGTTTTGCTTCCTTTGAGTAATTTACAAAAGTATCCTTCAGTTGAAGCTGAGGTTATGATTTGCGGTGGAGCTCCCAGAGGTTCTTTTCAGAAAACTTTAAATGGTACTTTTATCGGAGCTTTGAATACATGTGCTCGGATTAAAATAACCGACCCGAATCCGAATTGGGTAATTGAAACTATGCCGGGAGGAAGAGTTATGAGTGATATGCTATTACTCCCTAACGGCAACGTTTTGTTAATTAACGGAGCGGCAATGGGATCAGCTGGTTGGGAATCGGGTCGAAACCCGGTTTTGAATCCATTTCTTTATAAACCGAATGAACGGGTCGGGTCAAGATTTCAGTTACAAAAACCATCGGGTATTCCACGAATGTATCATTCCACTGCCGTTTTGGTTCGTGACGGTAGAGTACTTGTTGGTGGGAGTAATCCTCACATTGATTACAAATTTAACAATAATGTGTTGTTTCCAACGGAATTAAGATTAGAAGCATTTTCACCATCGTATTTAGAGGCAGGATTGGATGATGTGCGTCCAAAGATGGTGTTTCCTGCACCCCAATCACAAACTAAATTGAAATACGGTCAGAAATTGAAGGTTCGGTTTCAAGTGAAGGCAACATTGGTGAGAAATTCGGTTTCTGTTACAATGATTGCACCGCCTTTTAACACACACTCATTCTCCATGAATCAGAGACTGTTGGTGCTTGAAATGAAATTGCAAAACAATACTGTTGGAGAATCAACGTATGAAATTGAGGTAACAACACCAGGTTCAGCTATTCTTGCACCACCTGCTTATTATTTACTATTTGTGGTCCACCAAGAAGTTCCAAGCCAGGGTGTTTGGGTCCAATTAGTGTGA 1668 0.3999 MTHSLFLNILFFPLIIIIITTVTLPSPAESGSGQWQLLQKNIGIVGMHMQLLHNDRVVIFDRTDFGLSNLSLPNGRCRINPQEQVVKTDCTAHSLEYDVVSNSFRPLFVQTNVWCSSGSVSPDGKLIQTGGFNDGDRTVRIFNPCSSCDWQEFNASLAARRWYSTNHNLPDGRQIIIGGRRQFNYEFYPKKESTAKNTYSLPFLVQTNDAGAENNLYPFVFLNVDGNLFIFANNRAILFDYNSNNVVKTYPVIPGGDPRSYPSTGSAVLLPLSNLQKYPSVEAEVMICGGAPRGSFQKTLNGTFIGALNTCARIKITDPNPNWVIETMPGGRVMSDMLLLPNGNVLLINGAAMGSAGWESGRNPVLNPFLYKPNERVGSRFQLQKPSGIPRMYHSTAVLVRDGRVLVGGSNPHIDYKFNNNVLFPTELRLEAFSPSYLEAGLDDVRPKMVFPAPQSQTKLKYGQKLKVRFQVKATLVRNSVSVTMIAPPFNTHSFSMNQRLLVLEMKLQNNTVGESTYEIEVTTPGSAILAPPAYYLLFVVHQEVPSQGVWVQLV 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03256 555 Pfam Galactose oxidase-like, Early set domain 457 553 IPR015202 -
Car05g03256 555 PANTHER SECRETED PROTEIN-RELATED 29 554 - -
Car05g03256 555 Pfam Glyoxal oxidase N-terminus 47 290 IPR009880 -
Car05g03256 555 SUPERFAMILY E set domains 443 554 IPR014756 -
Car05g03256 555 CDD E_set_GO_C 441 554 IPR015202 -
Car05g03256 555 Gene3D - 29 443 IPR037293 -
Car05g03256 555 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 29 554 - -
Car05g03256 555 Gene3D Immunoglobulins 446 555 IPR013783 -
Car05g03256 555 SUPERFAMILY Galactose oxidase, central domain 95 439 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03256 Car-Chr5 77300086 77302220 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03256 05 77300086 77302220 Car05g03256 05 77300086 77302220 ECH
Car05g03256 05 77300086 77302220 Car04g03564 04 64790477 64793580 PCT