Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03244 ATGGATAAGGATACTTGTATGTCTGAATTGGGAATGGTTTCAGCTAAACGTCGTGAACGACAACATCATCTCTCTGCGTTGCAACAATTTCGTGGAGATGGAGACAATCCTAAACGACATAGAGATAATCATGCTGCACCTTCTCTAATTCCATCCCTTCCTCCACCTATCCCTGCCACAGGGTTGGAGGTGGGACAATTTCCAGCAGAGGTGAGCTCATCAGTAGTGTTTAGGTGTGTGAGAGTGAGGTCATTGGACGGTCCAGATGAACAATGCGCATATCAAACGGCTGTGAACATAGGAGGACATGTATTCAAAGGAATTCTATATGATCAAGGCCCTCCTTCAAGTACTACTGCACCTATTGATCATCATGGTTCTTCCAGTGAACCTCGCCACCAACTTCATTTCTTAACAGCTCCAATTGCAACTACCGGTAACCCATTCGACCCTTCAATTTACTCCGCTCCACTAAATGCTCCTTTCATGCCTCGTAGTACACAATTTTTCCACCCCTAA 519 0.4509 MDKDTCMSELGMVSAKRRERQHHLSALQQFRGDGDNPKRHRDNHAAPSLIPSLPPPIPATGLEVGQFPAEVSSSVVFRCVRVRSLDGPDEQCAYQTAVNIGGHVFKGILYDQGPPSSTTAPIDHHGSSSEPRHQLHFLTAPIATTGNPFDPSIYSAPLNAPFMPRSTQFFHP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03244 172 PANTHER PROTEIN SHI RELATED SEQUENCE 2 14 171 - -
Car05g03244 172 MobiDBLite consensus disorder prediction 30 54 - -
Car05g03244 172 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 66 114 IPR006511 -
Car05g03244 172 Pfam Domain of unknown function (DUF702) 14 114 - -
Car05g03244 172 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 14 171 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03244 Car-Chr5 77200838 77202261 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Car05g03244 DUF702 5.1e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03244 05 77200838 77202261 Car05g03244 05 77200838 77202261 ECH
Car04g03555 04 64697008 64698615 Car05g03244 05 77200838 77202261 PCT