Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03237 ATGGCAGCAGAAGAGGGACAAGTAATCGGTGTTCATACTGTGGATGCTTGGAAAGATCAGATCCAGAAGGGAAATGAGTCCGGGAAATTGATTGTTGTTGATTTTACTGCTTCTTGGTGCGGCCCATGCCGTTTCATTGCTCCAATTCTAGCAGAGATTGCTAAAAAGCTGCCGAATGTCACCTTCCTTAAGGTTGACGTGGATGAATTGAAGACTGTTGCTGAGGAGTGGGGTGTTGAAGCTATGCCAACATTCTTGTTCTTGAAAGAAGGAAAACTAGTGGACAAGGTTGTGGGTGCTCAGAAGGAGAAGCTGCAATCGACAATAGCCAAGCATGCTTGA 342 0.4561 MAAEEGQVIGVHTVDAWKDQIQKGNESGKLIVVDFTASWCGPCRFIAPILAEIAKKLPNVTFLKVDVDELKTVAEEWGVEAMPTFLFLKEGKLVDKVVGAQKEKLQSTIAKHA 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03237 113 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Car05g03237 113 PANTHER THIOREDOXIN 3 113 - -
Car05g03237 113 PANTHER THIOREDOXIN 3 113 - -
Car05g03237 113 Gene3D Glutaredoxin 1 113 - -
Car05g03237 113 ProSitePatterns Thioredoxin family active site. 32 50 IPR017937 -
Car05g03237 113 SUPERFAMILY Thioredoxin-like 5 112 IPR036249 -
Car05g03237 113 Pfam Thioredoxin 11 110 IPR013766 -
Car05g03237 113 CDD TRX_family 19 110 - -
Car05g03237 113 PRINTS Thioredoxin family signature 31 39 - -
Car05g03237 113 PRINTS Thioredoxin family signature 39 48 - -
Car05g03237 113 PRINTS Thioredoxin family signature 78 89 - -
Car05g03237 113 TIGRFAM thioredoxin: thioredoxin 25 112 IPR005746 GO:0015035
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03237 Car-Chr5 77120433 77122379 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03237 05 77120433 77122379 Car05g03237 05 77120433 77122379 ECH
Car04g03549 04 64642576 64644616 Car05g03237 05 77120433 77122379 PCT