Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03236 ATGAACATTACTTCAATTTCAATCCTATTACTACTTGTATTGTTTGTTTTGTTTTTAGGTTGTAACTGCAGCAATGTTAGTTACGATAGAAAGTCTCTTCTCATCAATGGCCACAGAAGAATCCTAATTTCTGGTTCAATTCACTATCCCAGAAGCACCCCTCAAATGTGGGAAGATCTAATTTGGAAGGCTAAACACGGTGGTCTTGATGTTATAGACACATATGTTTTTTGGGATGTTCATGAACCATCTCCTGGAAATTACAATTTTGAAGGAAGGTATGATCTAGTAAGGTTCATTAAGACAGTGCAAAAGGTGGGACTTTATGCCAATCTTCGCATTGGTCCTTATGTATGCGCTGAGTGGAATTTTGGGGGAATTCCTGTTTGGTTGAAGTATGTTCCTGGAATAAGTTTCAGAACAGATAATGGGCCTTTCAAGGCGGCAATGCAAGGTTTTACCCAGAAGATTGTCCAAATGATGAAGAGTGAGAAGTTGTTTCAATCTCAGGGCGGTCCAATCATTCTTTCTCAGATTGAGAACGAATACGGACCTGAGAGGAGGGCAATGGGAGCTGCTGGTCATGCATACCTAAATTGGGCTGCAAATATGGCTGTTGGATTAGGAACAGGAGTCCCTTGGGTGATGTGCAAGGAAAATGATGCCCCTGATCCTGTGATTAATTCATGTAATGGTTTTTACTGCGACAATTTCTCTCCAAATAAACCGTTTAAGCCTAGCTTGTGGACTGAGTCTTGGAGTGGCTGGTTTACAGATTTTGGTGGTCCAATTCCTCAGCGTCCAGTTCAGGATCTAGCATTTGCAGTAGCTCGTTTCGTTCAGAAGGGTGGCTCATATGTGAATTACTACATGTACCATGGAGGAACTAATTTTGGAAGATCAGCTGGGGGTCCATTTATTACAACAAGCTATGACTATGATGCTCCAATTGATGAATATGGTTTGATCAGGCAACCAAAATATAACCATTTGAAGGATCTTCATAAAGCTATAAAGCGTTGTGAGCATGCTTTGGTTTCTTCAGATCCGACTGTTACATCATTAGGAACACTTCAGCAGGCTCACGTATTCTCTGCAGGGACTGCAGAATGTGCGGCTTTTCTAGCAAACTATCATGAACAATCTGCTGCTACTGTGATTTTCAATAACAGGCACTATGAATTGCCTCCGTGGTCTATAAGTATCCTTCCTGATTGCAGAACTTCCGTATTTAATACTGCAAAAGTGAGATCGCAAACTTCAGTGGTAAAAATGCTTACTGTCAATCCTAGGTTCTCATGGGAGACCTATGATGAAGATCTATCTTCTCTAGATGAAAGTTCAAGAATTACAGCTGCTAGACTCTTAGAACACTTGAATGTTACCCGAGACACTAGTGACTATCTATGGTACATAACCAGTGTTGACATAAGTTCATCAGAGTCATTTCTTCGAGGAGGACACAAACCAAGCATTAACGTGCAGTCTGCAGGACATGCTGTCCATGTATTTGTTAATGGAAAATTTTCAGGGTCGGCTTTTGGGACAAGGAAACAGAGAAGCTGTACATTTAATGGGCCAGTTAATCTACATGCTGGAACAAATAAAATTGCTCTTCTCAGTGCGACTGTTGGATTGCCGAACGTTGGCCGGCATTATGAAACATGGGAGACAGGGATCACTGGTCCGGTTTTGCTCCATGGTCTTGACCATGGACCGAAAGATTTGACGCATAATAAATGGTCTTATCAGGTTGGCCTAAAAGGAGAGGCTTTGAATTTGGTGTCATTCGATGGGGTCTCATCTGTTGATTGGGTGCAAGATTCATTAGCTACACGAAGCCGGTCACAACTAAAATGGCACAAGGCTTATTTTAATGCACCTGAGGGAAATGAACCATTGGCTTTGGACATGGAAGGTATGGGTAAGGGCCAAGTATGGATCAATGGGCAGAGCATAGGAAGATATTGGCTGGCTTATGCAAAGGGCGACTGTAATTCTTGCAGCTATTCTGGGACATTCAAGCCTGTAAAGTGCCAACTTGGTTGTGGACAACCCACTCAACGATGGTATCATGTTCCAAGGTCCTGGCTAAAGCCAACAAATAACCTGATAATAGTGTTTGAAGAATTAGGTGGGAATCCTTGGAAAATATCTTTGGTAAAGAGAACAGTACATACTGCAGGAGTTCGTGATTAG 2199 0.4193 MNITSISILLLLVLFVLFLGCNCSNVSYDRKSLLINGHRRILISGSIHYPRSTPQMWEDLIWKAKHGGLDVIDTYVFWDVHEPSPGNYNFEGRYDLVRFIKTVQKVGLYANLRIGPYVCAEWNFGGIPVWLKYVPGISFRTDNGPFKAAMQGFTQKIVQMMKSEKLFQSQGGPIILSQIENEYGPERRAMGAAGHAYLNWAANMAVGLGTGVPWVMCKENDAPDPVINSCNGFYCDNFSPNKPFKPSLWTESWSGWFTDFGGPIPQRPVQDLAFAVARFVQKGGSYVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYNHLKDLHKAIKRCEHALVSSDPTVTSLGTLQQAHVFSAGTAECAAFLANYHEQSAATVIFNNRHYELPPWSISILPDCRTSVFNTAKVRSQTSVVKMLTVNPRFSWETYDEDLSSLDESSRITAARLLEHLNVTRDTSDYLWYITSVDISSSESFLRGGHKPSINVQSAGHAVHVFVNGKFSGSAFGTRKQRSCTFNGPVNLHAGTNKIALLSATVGLPNVGRHYETWETGITGPVLLHGLDHGPKDLTHNKWSYQVGLKGEALNLVSFDGVSSVDWVQDSLATRSRSQLKWHKAYFNAPEGNEPLALDMEGMGKGQVWINGQSIGRYWLAYAKGDCNSCSYSGTFKPVKCQLGCGQPTQRWYHVPRSWLKPTNNLIIVFEELGGNPWKISLVKRTVHTAGVRD 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03236 732 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Car05g03236 732 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Car05g03236 732 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Car05g03236 732 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Car05g03236 732 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Car05g03236 732 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Car05g03236 732 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Car05g03236 732 PRINTS Glycosyl hydrolase family 35 signature 616 630 IPR001944 GO:0004553|GO:0005975
Car05g03236 732 PRINTS Glycosyl hydrolase family 35 signature 643 659 IPR001944 GO:0004553|GO:0005975
Car05g03236 732 Pfam Glycosyl hydrolases family 35 32 337 IPR031330 -
Car05g03236 732 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Car05g03236 732 Gene3D Glycosidases 23 341 - -
Car05g03236 732 PANTHER BETA-GALACTOSIDASE 4 731 - -
Car05g03236 732 Pfam Beta-sandwich domain in beta galactosidase 345 416 IPR041392 -
Car05g03236 732 Gene3D - 437 583 - -
Car05g03236 732 PANTHER BETA-GALACTOSIDASE RELATED 4 731 IPR001944 GO:0004553|GO:0005975
Car05g03236 732 SUPERFAMILY (Trans)glycosidases 25 342 IPR017853 -
Car05g03236 732 Gene3D - 600 729 - -
Car05g03236 732 SUPERFAMILY Galactose-binding domain-like 400 570 IPR008979 -
Car05g03236 732 SUPERFAMILY Galactose-binding domain-like 578 725 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03236 Car-Chr5 77114835 77120339 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03236 05 77114835 77120339 Car05g03236 05 77114835 77120339 ECH
Car04g03548 04 64637106 64641856 Car05g03236 05 77114835 77120339 PCT