Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03179 ATCATATTGATATTGGCATTGGTGGAATCCCACACCACAAAGCCCCATGAAGACCAAAATCAATGGGGAGGTTTTGAAAGGAATACAGGGAACATTGCTTCACACTCTTGCATACATGACCAGATTCTTGAACAGAGGAAGCGTCCTGGTCGTAAGGTTTATTCAGTTACCCCACAGGTTTACGAGCCTGGTCTCTTGAAGCCCCTTAAGCATAAAGGTAGGACAATACTTGAAGTGTCAACATCATCAGGGCATCAAAAGGATGCAAAGGAACCTATTAGGATATTTCTAAATTATGATGCTGTTGGCCACTCCCCTGACAGAGACTGTCGAAAAGTTGGTGATATTGTCAAACTTGGAGAGCCTCCCACAACTTCTCTTCTTGGTTCCCCTACTTGCAATCCTCATGGTAACCCTCCAATCGTTGGTGATTGTTGGTATAACTGCACTTCTGAAGATATCTCAGGAGAGGACAAAAAGCATCGCCTTCGTAAGGCATTAGGTCAGACAGCTGACTGGTTTAGGAGAGCATTGGCTGTTGAGCATGTCAAGGGGAACTTGCGGTTAAGTGGATATTCTGCATGTGGACAAGATGGAGGCGTGCAGCTTCCCCGTGGATATATTGATGAGGGTGTTCCTGATGCCGACTTAGTTCTTTTGGTAACTACAAGACCTACAACTGGAAATACACTGGCATGGGCAGTGGCATGTGAACGGGATCAATGGGGCCGTGCTATAGCTGGACATGTGAATGTTGCTCCTCGCCATTTGACTGCTGAGGCGGAGACTTTGCTTTCAGCTACTCTAATACACGAGGTTATGCATGTTCTTGGTTTTGATCCGCACGCCTTTGCTCATTTTAGAGATGAAAGGAAAAGACGGCGTGATCAGGTTACCGAGCAAGTAATGGATGAAAAGCTTGGACGGACGGTCAATCGAGTGGTGCTTCCTCGCGTTGTCATGCATTCGCGATATCATTATGCGGCATTCTCTGGAAATTTTACTGGTTTAGAACTGGAAGATGGGGGAGGACGCGGCACATCAGGGTCTCACTGGGAGAAAAGGCTTCTGATGAATGAGATTATGACCGGTTCCGTGGATACAAGATCTGTAGTTTCAAAAATGACTTTGGCTCTCTTAGAAGATAGTGGATGGTACAAAGCCAATTATAGCATGGCAGACCGTCTTGATTGGGGTCGCAACCAAGGTACTGAATTTGTTACCTCCCCTTGCAATAACTGGAAGGGAGCTTACCATTGCAACACAACACAGTTTTCTGGCTGTACATATAACAGAGAGGCAGAGGGATACTGCCCGATCCTAACATATAGTGGAGACCTCCCTCAGTGGGCGCGATATTTTCCACAAGCTAATAAAGGTGGACAATCCTCATTGGCTGATTATTGCACTTATTTTGTTGCATACTCTGATGGGTCATGTACAGACACTAACAGTGCACGAGCACCTGATAGAATGCTTGGTGAAGTCAGAGGAAGTAACTCTAGATGTATGGCCTCATCATTAGTGCGCACAGGATTTGTACGAGGTTCTATGACCCAGGGAAATGGTTGTTATCAGCACAGATGTATAAACAATTCTTTAGAGGTTGCTGTGGACGGTGACTGGAAAGTCTGTCCTCGTGCTGGTGGATCCATTCAGTTCCCTGGATTTAATGGCGACTTAATTTGCCCTGCATATTCCGAGCTCTGTAACTCTGACCCAGTATCAGTGTCTGGCCAATGTCCCAATTCATGTAATTTCAATGGAGATTGTGTTGATGAAAGATGCCACTGCTTTCTGGGATTTCATGGTCATGATTGCAGTAGACGTTCCTGCCCCAGCAATTGCAATAGCAATGGCATGTGCCTTTCCAATGGGATTTGTGAATGTAAAACTGGCTACACCGGCATTGACTGTTCGACTGCTGTGTGTGATGAACAATGCAGCCTTCATGGTGGGGTTTGTGATAATGGAGTTTGTGAATTCCGTTGTTCTGACTATGCCGGATACACGTGCCAGAACAGCTCCATGCTATTATCTAGTCTCTCAGTATGCAAAAATGTACTGGGAAATGATGTATCTGGACAGCATTGTGCACCCAGCGAGCCTAGCATACTACAGCAGTTGGAAGAAGTGGTTGTCATGCCCAACTATAACCGGTTATTCCCTGGGGGGGCTAGGAAGTTATTTAATATATTTGGTAGCACCTATTGTGACGAGGCTGCTAAACGGCTTGCCTGCTGGATCTCAATCCAGAAGTGTGACAAGGATGGAGACAACAGGCTTCGGGTATGCCACTCTGCATGCCAATCTTATAATATAGCATGTGGAGCTTCACTTGACTGCTCTGACCAAACCCTCTTCAGCAGTGAGGGTGAGGGGGAGGGTCAGTGCACTGGCTTCGGGGAGACGAAATTGTCATGGTTTAATCGCATGCGAAGTGGTTTTTCTTTGAGAAGTAGTCCCTTGAAAGGAATATCTGTAAGATATAGGCAGCTTTAA 2502 0.4596 IILILALVESHTTKPHEDQNQWGGFERNTGNIASHSCIHDQILEQRKRPGRKVYSVTPQVYEPGLLKPLKHKGRTILEVSTSSGHQKDAKEPIRIFLNYDAVGHSPDRDCRKVGDIVKLGEPPTTSLLGSPTCNPHGNPPIVGDCWYNCTSEDISGEDKKHRLRKALGQTADWFRRALAVEHVKGNLRLSGYSACGQDGGVQLPRGYIDEGVPDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRDQVTEQVMDEKLGRTVNRVVLPRVVMHSRYHYAAFSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGTEFVTSPCNNWKGAYHCNTTQFSGCTYNREAEGYCPILTYSGDLPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINNSLEVAVDGDWKVCPRAGGSIQFPGFNGDLICPAYSELCNSDPVSVSGQCPNSCNFNGDCVDERCHCFLGFHGHDCSRRSCPSNCNSNGMCLSNGICECKTGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLGNDVSGQHCAPSEPSILQQLEEVVVMPNYNRLFPGGARKLFNIFGSTYCDEAAKRLACWISIQKCDKDGDNRLRVCHSACQSYNIACGASLDCSDQTLFSSEGEGEGQCTGFGETKLSWFNRMRSGFSLRSSPLKGISVRYRQL 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03179 833 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 1 805 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Car05g03179 833 Gene3D Leishmanolysin domain 3 412 473 - -
Car05g03179 833 Gene3D Leishmanolysin , domain 2 286 411 - -
Car05g03179 833 PRINTS Leishmanolysin (M8) metalloprotease family signature 221 250 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Car05g03179 833 PRINTS Leishmanolysin (M8) metalloprotease family signature 374 403 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Car05g03179 833 Gene3D - 86 276 - -
Car05g03179 833 ProSitePatterns EGF-like domain signature 2. 628 639 IPR000742 -
Car05g03179 833 Pfam Leishmanolysin 147 572 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Car05g03179 833 ProSitePatterns EGF-like domain signature 1. 628 639 IPR000742 -
Car05g03179 833 Gene3D - 571 611 - -
Car05g03179 833 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 1 805 - -
Car05g03179 833 Gene3D Leishmanolysin domain 4 475 570 - -
Car05g03179 833 Pfam EGF-like domain 612 639 IPR013111 -
Car05g03179 833 ProSiteProfiles EGF-like domain profile. 608 640 IPR000742 -
Car05g03179 833 Gene3D Laminin 612 642 - -
Car05g03179 833 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 91 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03179 Car-Chr5 76672879 76679946 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03179 05 76672879 76679946 Car05g03179 05 76672879 76679946 ECH
Car04g03488 04 64000542 64008929 Car05g03179 05 76672879 76679946 PCT