Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03175 ATGGCGAAATCAAGTGCCGACGATTCCGAACTCCGGCGAGCTTGCGAGGCTGCAATTGAAGGAACCAAACAGAAGATCGTCATTTCCATCCGAGTCGTCAAGACTCTCGGCACCTGGGGAAAAGCTTCCAAGCTTGGTCGTCAAATGGCGAAACCTAGGGTTCTCGCTATCTCTACAAAAGCAAAAAGTCAACGGACAAAAGCTTTTCTTCGAGTTTTAAAGTATTCGAATGGAGGAGTTCTTGAGCCTGCTAAAATATACAAGCTGAAGCATCTCTCCAAAGTGGAAGTTGCAACAAATGATCCCAGTGGATGTACTTTTACGTTGGGATTTGATAACCTTAGAAATCACAGTGTGGCTCCTCCACAGTGGACAATGCGCAATATTGATGACAGGAATCGCCTCCTGCTTTCTATCTTGAATATTTGCAAAGATGTCTTGGGTCGCCTTCCTAAGGTGGTTGGTGTTGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCTGCAGTTTCCACTCATGATAACCAAGCAGACGGTGCTACTTTTGAATCTTCTGCCAATGAAACAGAATTGAAAGTCAATGTTGAAAAGGAGCTTGTCTCCCAAGCAGAGGAAGAGGACATGGAAGCTCTTTTGGGAACTTATATAATGGGCATTAGTCAAGCAGAGGCATTTTCTGAAAGGTTGAAAAGAGAGCTCCAGGCTCTAGAAGCAGCAAATGTGCATGCTATTTTAGAAAGTGAACCTTTAATAGATGAGGTGTTGCAAGGGCTTGAAGCTGCTTCGAATTGTGTGGAAGATATGGATGAATGGTTAGGCATGTTCAATGTGAAACTCCGACACATGAGGGAGGACATTGAATCAATTGAAATCCGCAATAACAAGTTGGAAATGCAATCAGTAAATAACAAAACTCTCATTGAAGAGCTTGATAAACTTCTTGAGCAATTGAATATCCCTTCTGAGTATTCAGCATTTTTGACTGGAGATTCGTTTGATGAAGCGCAAATGCTTCAAAATATAGAAGCATGTGAGTGGTTGACTGGTGCCTTGCGTGGTTTTGAAGTGTCCAACATAGATCCTACTTATGCCAAGATGAGAGCTTTTAAAGAGAAACGAGGAGAACTTCAAATATTAAAATCTACTTTTGTCAGGAGAGCTTCTGAATTTTTGAGGAATTACTTTGCTACTTTTGTTGATTTCATGATGAATGATAAAAACTACTTTTCTCAGCGGGGACAATTGAAAAGGCCAGATCATGCTGACCTGCGATACAAGTGCAGGACATATGCACGCCTTTTGCAACATTTAAAGATTCTGGATAAGAATTGCTTGGGCCCATTGAAAAAAGCTTATTGCTGTTCTCTAAACTTGCTTCTTCGCAGGGAGGCCCGCGAGTTTGCTAATGAACTTCGTGCTAGTACTAAAACGTCTAGAAATCCAACTGGTTGGCTTGAAGGTTCCACAGGTTCTGGTCAGAATGTAAACTCTGCTGACTCTTCTACAGTTTCTGATGCATATGCAAAGCTGCTCACCGTATTTATCCCACTTATGGTGGATGAGAGTTCTTTTTTTGCACACTTCATGTGCTTCGAAGTTCCTACACTTGATGGTAATAAATCTGGATACAATGATGGTGCTAACGATGACGACGATTTGGGAATTGCGGACATTGATGAGAATGACAGTAAATCCAGTCTAAGTTCTGTGGAGCTTGCAGCTTTAAACGAATCACTTCAGGATTTGCTTGATGGAATTCAAGAAGACTTCTATGCTGTTGTGGATTGGGCATACAAGATTGATCCTTTATGCTGCATATCAATGCATGGGACAACAGAACGCTATCTCTCTGGTCAAAAGGCTGATGCAGCAAGATTTGTCCGCCTTTTACTTGGTGACCTTGAGTCTCGGATATCTATGCTATTCAGCCGGTTTGTTGATGAAGCTAGCCATCAGATTGAAAGAAGTGAGCGCAATGTTCGCCAAAGTGTCCTACCCTACATTCCCAGATTTGCAACCCTTGCAACACGGATGGAGCAGTACATTGCGGGACAGTCCAGGGATTTGGTTGACCAAGCATACACAAAATTTGTTAGCATAATGTTTGTAACTTTGGAAAAACTTGCACAAACAGAACCAAAGTATGCAGATATTTTTCTTATAGAGAACTATGCTGCTTTTCAGAATAGTTTGTATGACCTAGCCAACGTGGTGCCTACTCTGGCCAAATTTTATCATCAAGCTAGTGAAGCGTATGAGCAATCATGCACACGCCATATTAGCATGATTATCTATTATCAATTTGAACGGCTTTTCCAATTTGCTCGAAGGATTGAGGACTTGATTCTCAGTAATGTTTCACCTGAAGAGATTCCCTTCCAGCTTGGGCTGTCAAAAGTGGATTTTCGGAAGATGCTAAGATCCAGTTTGTCTGGGATGGACAAGTCCATTGCTGCAATGTATAAGAAATTGCAGAAGAATTTGACTTCTGAGGAACTGTTACCTTCCTTATGGGATAAATGCAAGAAGGATTTTGTCGATAAGTACGACAGTTTTGTCCAACTTTGCGCCAAGATTTACCCTGCTGAGTCAGTCCCTTCTACAGCAGAATTGAGAGAACTTTTAGCTTCAATGTAA 2643 0.417 MAKSSADDSELRRACEAAIEGTKQKIVISIRVVKTLGTWGKASKLGRQMAKPRVLAISTKAKSQRTKAFLRVLKYSNGGVLEPAKIYKLKHLSKVEVATNDPSGCTFTLGFDNLRNHSVAPPQWTMRNIDDRNRLLLSILNICKDVLGRLPKVVGVDVVEMALWAKENTPAVSTHDNQADGATFESSANETELKVNVEKELVSQAEEEDMEALLGTYIMGISQAEAFSERLKRELQALEAANVHAILESEPLIDEVLQGLEAASNCVEDMDEWLGMFNVKLRHMREDIESIEIRNNKLEMQSVNNKTLIEELDKLLEQLNIPSEYSAFLTGDSFDEAQMLQNIEACEWLTGALRGFEVSNIDPTYAKMRAFKEKRGELQILKSTFVRRASEFLRNYFATFVDFMMNDKNYFSQRGQLKRPDHADLRYKCRTYARLLQHLKILDKNCLGPLKKAYCCSLNLLLRREAREFANELRASTKTSRNPTGWLEGSTGSGQNVNSADSSTVSDAYAKLLTVFIPLMVDESSFFAHFMCFEVPTLDGNKSGYNDGANDDDDLGIADIDENDSKSSLSSVELAALNESLQDLLDGIQEDFYAVVDWAYKIDPLCCISMHGTTERYLSGQKADAARFVRLLLGDLESRISMLFSRFVDEASHQIERSERNVRQSVLPYIPRFATLATRMEQYIAGQSRDLVDQAYTKFVSIMFVTLEKLAQTEPKYADIFLIENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQSCTRHISMIIYYQFERLFQFARRIEDLILSNVSPEEIPFQLGLSKVDFRKMLRSSLSGMDKSIAAMYKKLQKNLTSEELLPSLWDKCKKDFVDKYDSFVQLCAKIYPAESVPSTAELRELLASM 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03175 880 Pfam Exocyst complex component Sec3 224 863 IPR019160 GO:0000145|GO:0006887
Car05g03175 880 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 880 - -
Car05g03175 880 Coils Coil 188 208 - -
Car05g03175 880 Coils Coil 221 248 - -
Car05g03175 880 MobiDBLite consensus disorder prediction 475 499 - -
Car05g03175 880 Coils Coil 281 318 - -
Car05g03175 880 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 49 144 IPR028258 -
Car05g03175 880 MobiDBLite consensus disorder prediction 473 499 - -
Car05g03175 880 PANTHER SEC3/SYNTAXIN-RELATED 1 880 - -
Car05g03175 880 SMART Sec3_PIP2_bind_2 48 146 IPR028258 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03175 Car-Chr5 76634950 76651051 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03175 05 76634950 76651051 Car05g03175 05 76634950 76651051 ECH
Car04g03477 04 63834354 63849431 Car05g03175 05 76634950 76651051 PCT