Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02771 ATGGAGACTCGCAGCGCCGCAAGAAAGAGGGCAAACGCTGAACCACTTGTCATAAACCCTAAAAAACAGAGGGTTGTATTGGGAGAACTTCCCAATTTACCCAATCTCAATGAAAATCAACCCAAAGAAAAACCCCAAACCAGGAAGAATTCAAAACTAAAGAAATCAACAACAAACCATCCTTTGGTTTTTTCCAAGTCGGATTTGCCAGTTCAGAGAAACAACAATGGAAAACGTGATAATCAACAGATTTATGAACCTTATGAATCTGATATATCTAACTATCTTCGTTCAATGGAGATGCAGAAAAAGAGAAGACCTATGGTTGGTTACATTGAGAAAATTCAGAAAAATGTAACTACAAATATGAGAGGAATATTGGTTGATTGGTTAGTTGAGGTTGCAGATGAATACAAGCTTCTGCCTCACACCCTTCATCTCTCTGTTTCATACATTGATAGATTCCTATCTCTTCACTCTGTCAGCAAATCACACCTTCAGTTGCTAGGTGTTTCGTCTATGCTCATCGCATCAAAGTATGAAGAAATCACCCCACCCAAGGCGGTAGATTTCTGCCACATTACTGATAACACATATGAGCTGGCAGAGGTTATAAAAATGGAAGCTGATATTCTAAAGTCTCTCAACTTTGAAATGGGCAGCCCTAATGTTCACACATTTCTAAAAAGGTATGTTGGATTTGCAACTGAAAATCAAAAGACTTCAAAGTTGCAAATGGAATTTCTATGCAACTATCTTGCTGATTTAAGCTTGTTGGACTATGACTGTATAAGATTTTTGCCTTCTGTTGTGGCGGCCTCTGTAATATTTCTTGCCAGATTTATTATCCGTCCTGCCTTACGTCCCTGGGTAATTGTTTGCTGTTATTGTACTTTAATCTATTTGTTTCTATTAAATACATGTGAATATTTGTCATTCAAGGCACTTAAATGTTGA 957 0.3751 METRSAARKRANAEPLVINPKKQRVVLGELPNLPNLNENQPKEKPQTRKNSKLKKSTTNHPLVFSKSDLPVQRNNNGKRDNQQIYEPYESDISNYLRSMEMQKKRRPMVGYIEKIQKNVTTNMRGILVDWLVEVADEYKLLPHTLHLSVSYIDRFLSLHSVSKSHLQLLGVSSMLIASKYEEITPPKAVDFCHITDNTYELAEVIKMEADILKSLNFEMGSPNVHTFLKRYVGFATENQKTSKLQMEFLCNYLADLSLLDYDCIRFLPSVVAASVIFLARFIIRPALRPWVIVCCYCTLIYLFLLNTCEYLSFKALKC 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02771 318 CDD CYCLIN 123 212 IPR013763 -
Car05g02771 318 SUPERFAMILY Cyclin-like 80 219 IPR036915 -
Car05g02771 318 MobiDBLite consensus disorder prediction 56 82 - -
Car05g02771 318 CDD CYCLIN 222 298 IPR013763 -
Car05g02771 318 Gene3D - 91 291 - -
Car05g02771 318 SMART Cyclin_C_2 222 318 IPR004367 -
Car05g02771 318 Gene3D - 105 220 - -
Car05g02771 318 MobiDBLite consensus disorder prediction 1 82 - -
Car05g02771 318 Pfam Cyclin, N-terminal domain 91 219 IPR006671 -
Car05g02771 318 SUPERFAMILY Cyclin-like 201 280 IPR036915 -
Car05g02771 318 PANTHER CYCLIN-A3-1-RELATED 16 291 - -
Car05g02771 318 PANTHER CYCLINS 16 291 IPR039361 -
Car05g02771 318 SMART cyclin_7 129 213 IPR013763 -
Car05g02771 318 SMART cyclin_7 226 314 IPR013763 -
Car05g02771 318 Pfam Cyclin, C-terminal domain 222 296 IPR004367 -
Car05g02771 318 ProSitePatterns Cyclins signature. 124 155 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02771 Car-Chr5 72833585 72835978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02771 3 290 Core Cell Cycle Gene Families AT5G43080 53.952 4.25e-104 306
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02771 05 72833585 72835978 Car05g02771 05 72833585 72835978 ECH
Car04g03404 04 62680981 62684050 Car05g02771 05 72833585 72835978 PCT