Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02760 ATGGAAGCAGGGGAAAATTGTTGCGTTAAGGTTGCGGTTCATGTACGGCCACTAATCACCGACGAGAAGCTTCAAGGATGCAAAGATTGTGTCACCGTCGTCGCCGGGAAGCCTCAGGTGCAAATTGGGGCCCACTCATTTACATTTGATCATGTCTATGGAAGCACTGGTTCTCCATCGTCTAACATGTTTGAAGAATGTGTTGCTCCACTTGTTGATGGTTTGTTCCAAGGATATAATGCTACTGTTCTTGCATATGGTCAGACAGGTTCTGGGAAAACATATACCATGGGAACTGGCTTTAAAGAAGGTTTTCAAACAGGAATAATACCTCAAGTTATGAATGTTTTGTTCAACAAAATTGGGACCTTAAAGCACCAGATTGAATTTCAGTTGCATGTTTCCTTTATTGAGATTCTTAAAGAAGAAGTTAGAGATTTACTGGATCCCTCCTCCATGAGCAAACCAGAAACTGCAAACGGGCATGCAGGAAAAATGACCTCTCCTGGGAAGCCGCCAATACAAATTCGTGAGACATCAAATGGTGTTATAACCCTAGCGGGATCTACAGAAGTCGGTGTCGCAACACTAAAAGAAATGGCTGCTTGTCTGGAACAAGGATCCTCGAGTAGAGCAACTGGGAGCACAAATATGAACAACCAATCCAGCCGATCTCATGCCATCTTCACCATCACATTAGAGCAAATGTGCAAGCCCAAGAGTCCTAATGATAGCTGCTTGAATGATACTATGAATGACGAGTATCTTTGTGCTAAGTTACACTTAGTAGATCTCGCTGGATCAGAACGAGCTAAAAGAACAGGGTCTGACGGCATGCGATTTAAGGAAGGAGTTCACATTAACAAAGGCCTTCTAGCACTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCATATAGGGACAGCAAACTTACTAGGCTTTTGCAGGATTCACTTGGGGGTAACAGCAGAACTGTAATGATAGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTGAACACTTTGAAGTATGCAAATCGTGCGCGCAATATCCAAAATAAGCCTGTTGTCAATAGAGATCCCATGTCCAGTGAGATGCTAAAAATGCGACAACAACTGGAGTATTTGCAGGCAGAACTCTGTGCTCGTACTGGTGGCTCATCAGAGGAAGTTCAGGTTCTTAAGGAAAGGATTGCTTGGCTTGAAGCTGCTAATGAAGATCTTTGCCGTGAACTTCATGAATACCGTAGTAGATGCTCTGTTGTAGAGCCAAGTGAAAAGGATGCTTACgataatggcacatgcattgtgaagacggatgggcTTAAGAGGTTACCTATCATAGCGGCTGATTATCCGATGAGTGAAACAGCAGGTGATTCAAGGGAAATTGAAGAAGTAGCAAAAGAGTGGGAGCACAAACTTCTGCAAAATAGTATGGATAGAGAGTTGCATGAATTGAATAAACGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTGTTTGGAGTATCTGATGCTGAAGTACTCAAACAACACTTTGGAAGGAAGATAATGGAACTTGAGGATGAGAAGAGAACAGTGCAGCGAGAAAGAGACTGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAATTCTGATGGACAAACACAGAAATTAGAGGATATCCACGCCCAAAAACTGAAATCACTTGAAGCACAGattatggatatgaagaagaagcaagagagccaggtccaacttatgaagcaaaagcaaaaaagtgatgatgcaacaaagaggctgcaagatgaaatacagtctataaaggcccaaaaggttcaattgcaacagaggataaaacaagaggcagaacagtttcgacagtggAAGGCTTCTAGAGAGAAAGAATTGTTGCAATTAAGGAAGGAGGGAAGGAAAAATGAATATGAAAAGCACAAGCTGCAAGCTTTAAATCAACGCCAGAAAATGGTCCTTCAGAGAAAAACTGAAGAAGCTGCAATGGCAACCAAGAGGTTAAAGGAGTTGCTAGAAGCTCGGAAAACTTCCAGCCGAGACACTTTAGTTGCAACAAATGGACATGGAACAAATGGACAGAGCAATGAGAAGTCCTTACAACTGTGGCTTGATCACGAACTAGAAGTCATGGTAAAAGAACATGAAGTTCGTTTTGAGTATGAGAAACAAAGCCAAGTGCGAGCTGCCCTTGCAGAGGAGCTAGCCATGCTGAAGCATGTAAGTGAGTTTGCTGCTAAGGGTCTCAGTCCTCCAAGAGGAAAGAATGGATTTGCCAGGGCATCCTCCATGTCACCAAATGCAAGAATGGCGAGAATAGCTTCACTTGAGAACATGTTGAGTATATCCTCTAATTCACTTGTAGCAATGGCTTCTCAACTTTCCGAGGCAGAAGAACGAGAACGGGCATTCTCTAGTCGTGGACGTTGGAATCAGTTGCGTTCAATGGGAGAAGCCAAAAATTTGCTTCAATATATGTTTAATTCTGTTGGAGATGCTAGGTGCCAACTATGGGAGAAGGACATGGAGATCAGAGAAATGAAAGATCAAATCAAAGAACTTGTTAGTCTTTTGCGGCAAAGTGAGATGAAGAGAAAGGAATCTGAGAAAGAGTTAAAAGTCAGAGAGCAAGCTGGCACTGCCACATTAGCTACCCCAGCTTCTGGAAATTCTCCAAATTCATTGAAACATTATACTGAAGATATGAGGGGACCTTTATCTCCAATGTCTGTGCCAATACCAAGACAACTCAAATATACGCCAGGAGTTGCTAATGGCCAAACTAAGGAATCCGCAGCATTTGTAGATCATGGTAGAAAGATGAAACCCATTGGGCAGCTGTCGATGAAAAAACTAGCAATTGTAGGACAAGCTTCTGGCAAGTTATGGAGGTGGAAAAGAAGTCATCATCAGTGGCTACTACAATTCAAGTGGAAGTGGCAGAAACCATGGAGACTTTCAGAATGGATTCGACACAGTGATGAGACAATCATGAGAGCAAGACCACGATCACAGGCTTTGCCACACATCACAAGATGA 3087 0.4001 MEAGENCCVKVAVHVRPLITDEKLQGCKDCVTVVAGKPQVQIGAHSFTFDHVYGSTGSPSSNMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKEGFQTGIIPQVMNVLFNKIGTLKHQIEFQLHVSFIEILKEEVRDLLDPSSMSKPETANGHAGKMTSPGKPPIQIRETSNGVITLAGSTEVGVATLKEMAACLEQGSSSRATGSTNMNNQSSRSHAIFTITLEQMCKPKSPNDSCLNDTMNDEYLCAKLHLVDLAGSERAKRTGSDGMRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSSEMLKMRQQLEYLQAELCARTGGSSEEVQVLKERIAWLEAANEDLCRELHEYRSRCSVVEPSEKDAYDNGTCIVKTDGLKRLPIIAADYPMSETAGDSREIEEVAKEWEHKLLQNSMDRELHELNKRLEQKESEMKLFGVSDAEVLKQHFGRKIMELEDEKRTVQRERDCLLAEVENLAANSDGQTQKLEDIHAQKLKSLEAQIMDMKKKQESQVQLMKQKQKSDDATKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRKNEYEKHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKTSSRDTLVATNGHGTNGQSNEKSLQLWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKHVSEFAAKGLSPPRGKNGFARASSMSPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFSSRGRWNQLRSMGEAKNLLQYMFNSVGDARCQLWEKDMEIREMKDQIKELVSLLRQSEMKRKESEKELKVREQAGTATLATPASGNSPNSLKHYTEDMRGPLSPMSVPIPRQLKYTPGVANGQTKESAAFVDHGRKMKPIGQLSMKKLAIVGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIMRARPRSQALPHITR 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02760 1028 Coils Coil 860 894 - -
Car05g02760 1028 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Car05g02760 1028 Coils Coil 522 556 - -
Car05g02760 1028 Coils Coil 403 423 - -
Car05g02760 1028 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 1026 - -
Car05g02760 1028 MobiDBLite consensus disorder prediction 881 910 - -
Car05g02760 1028 Coils Coil 565 585 - -
Car05g02760 1028 Pfam Kinesin motor domain 16 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g02760 1028 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g02760 1028 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g02760 1028 Coils Coil 489 509 - -
Car05g02760 1028 Coils Coil 596 637 - -
Car05g02760 1028 CDD KISc_KIF4 7 364 - -
Car05g02760 1028 Gene3D Kinesin motor domain 2 391 IPR036961 -
Car05g02760 1028 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g02760 1028 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g02760 1028 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g02760 1028 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g02760 1028 MobiDBLite consensus disorder prediction 150 176 - -
Car05g02760 1028 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 1026 - -
Car05g02760 1028 Coils Coil 670 690 - -
Car05g02760 1028 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 394 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02760 Car-Chr5 72688138 72700301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02760 9 387 Calmodulin-binding Proteins AT5G65930 33.681 5.48e-54 203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02760 05 72688138 72700301 Car05g02760 05 72688138 72700301 ECH
Car04g03416 04 62839832 62850503 Car05g02760 05 72688138 72700301 PCT