Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02739 ATGTCTGGTCGGAGTGAACACCAAAAATCCGTTCCCCTTTCGGTTCTCTTGAAGCGTGAATTGGCGAATGAGAAAATCGAGAAACCTGATATGGTAGTTGTTTATGGCCATGCTAGTGAGAACAAGAAAGGAGAGGATTTCATTTTACTAAAGACCGAATGCCAAAGAGTTGTGGCAGATGGTGTTTCTACGTATTCTGTTTTTGGGCTATTTGATGGACACAATGGATCTGCTGCTGCTATTTATGCCAAGGAGAATCTTCTGAACAATGTTTTATGTGCCATTCCTCCAGATCTCAACAGAGATGAGTGGGTAGCAGCATTGCCCAGGGCTTTGGTTGCTGGCTTTGTAAAAACTGATAAAGATTTTCAACAGAAAGCAAGGACATCTGGAACAACTGTAACCTTTGTGATTATAGAAGGATGGGTTATAACAGTTGCATCTGTTGGTGATTCCCGTTGCGTACTTGAACCTTCTGAAGGTGGGAGTCATGACTTGTCAGCAGATCATCGACTAGAAACCAATGAAGAGGAGAGGGTGCGCATCAGTTCTAGTGGAGGTGAAGTTGGTCGGCTAAATACAGGTGGAGGTGCAGAGGTTGGTCCGTTGAGATGTTGGCCTGGTGGCTTGTGTCTCTCTCGATCCATTGGTGATATGGATGTTGGCGAATTTATTGTCCCTGTACCATATGTAAAGCAAGTGAAGCTTTCCACTGCTGGAGGAAGGCTTATTATCTGCAGTGATGGAGTCTGGGATGCTCTAACTGCAGAAATGGTCCTTGATTGTTGTCGTGGGATGTCAGCGGAGGCTGCCGCACCACATATTGTAAAAGAATCTCTGCAAGCAAAGGGACTTAGAGACGACACAACCTGCATCGTGGTCGACATATTACCCCAGGAGAAGCCACCTACTTCTGTACCAACACTAAAGAGACCGGTCAAAGGAATGTTGAAAGCCATTTTTCGCAAAAAATCCTCTCAGTCACCATATATTGAAAAAGAATACGTTGAACCAGATATAGTACAGGAACTATACGAAGAAGGATCTGCTATGCTTTCAGAAAGGTTAGAAACAAAATATCCACTCTGCAACATGTTCAAGTTGTTCGTGTGTGCAGTGTGTCAAATAGAGATTAAACCTGGGGAGGGTATTTCAGTACATGAAGGTACAGATAAACCAGGAAAATTGCGTCCCTGGGATGGACCTTTCCTTTGTTTAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAACGAACCTCAGATAGACTTAGCAGTGGAAGTGACTAA 1290 0.4395 MSGRSEHQKSVPLSVLLKRELANEKIEKPDMVVVYGHASENKKGEDFILLKTECQRVVADGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLCAIPPDLNRDEWVAALPRALVAGFVKTDKDFQQKARTSGTTVTFVIIEGWVITVASVGDSRCVLEPSEGGSHDLSADHRLETNEEERVRISSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSTAGGRLIICSDGVWDALTAEMVLDCCRGMSAEAAAPHIVKESLQAKGLRDDTTCIVVDILPQEKPPTSVPTLKRPVKGMLKAIFRKKSSQSPYIEKEYVEPDIVQELYEEGSAMLSERLETKYPLCNMFKLFVCAVCQIEIKPGEGISVHEGTDKPGKLRPWDGPFLCLSCQEKKEAMEGKRTSDRLSSGSD 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02739 429 CDD PP2Cc 41 296 IPR001932 -
Car05g02739 429 Pfam Protein phosphatase 2C 56 283 IPR001932 -
Car05g02739 429 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 3 425 - -
Car05g02739 429 PANTHER ALPHABET, ISOFORM E-RELATED 3 425 - -
Car05g02739 429 ProSiteProfiles PPM-type phosphatase domain profile. 34 296 IPR001932 -
Car05g02739 429 SMART PP2C_4 24 294 IPR001932 -
Car05g02739 429 Gene3D - 26 303 IPR036457 -
Car05g02739 429 SMART PP2C_SIG_2 50 296 IPR001932 -
Car05g02739 429 SUPERFAMILY PP2C-like 36 296 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02739 Car-Chr5 72473906 72477411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02739 1 429 PP2C-type Phosphatase Gene Family AT1G47380 75.870 0.0 683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02739 05 72473906 72477411 Car05g02739 05 72473906 72477411 ECH
Car04g03449 04 63162217 63166840 Car05g02739 05 72473906 72477411 PCT