Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02730 ATGAACACGACCGTGAGGACGAGGATGCAACCTAGGAAAGCTCCAATGTCACATGAAAAAGAAGAGATGAAGGGAAGCTCACAAAAGGGTATGAGGAATGAAGTTAAAGACAGAAAATTGGCTTTGCAACAAGATGTGGAGAGGTTGAAGAATAAGCTTAGGCATGAAGAGAACATTTCCAAGGCATTGGAGAGAGCTTTGAATAGGCCTTTGGGAGCTCTTCCTCGTCTTCCACCTTATCTTCCTCCCTATACATTAGGACTTGTGGCCGAAGTTGCGGTACTCGAAGAAGAAATAGTTAGGCTTGAAGAGAAGGTCTTAAATTTCAGGCAAGATTTGTATCAAGAAGCAGTTTACATGTCATCCTCAAAGATGAAACTTGAGAATTCAGCTGCATCATCTGTGAACAATGCAAACCCAAATAATAGTACAAAATTGATTAATGCTGCAAAATCTGGCACTAGGTTAACAACAGCACTTCCTGATGATAAACAAGGAAAAAGTATTCAATCAAGTGCTCATTCTTTCAAGTGTAGCAAGCAATCTATATGTAAAGACCAAATGACAAAAACTCCAATTAAGAAAATTCCAAGTGAAAATAAATCACTACACACACGTTTGAAACCTCCCAATAAGCAGCAGCAAGAACTAAGGCTGAACAACAAACCAACTGCAGAAGTAAGAAATCATCGTCTACACGAAACGCTTTCAGGAGATGAAAGTCCAAATATAATCTCTGAAAATATTCTCAAGTGTTTAACTAGCATTCTCTTGAGAATGAGTACATTGAAGAATCAAGTCTCTGCAGAATATTCAGATCCTTATGGTATCTTGGTATTTGGAATGAGAGATATTGGTCCATACAAGCAATTATGTTCTAGTATTGAAGCTGAATCTTTTAATCCAACACAAACTGCTAAGTCTTTGTTTGTACTGCATCGATTAAAGTATTTGAGAAAACTAGCCTGTGTCAACATTGAGAACCTGAACCATCAAGAGAAGCTTGCATTCTGGATCAACATATATAACGCGTGTATGATGAATGCTTTTATAGAAAATGGCATACCAGAAAGTCCTGAAATGGTTGTTGCATTGATGCAGAAGGCAACAATAAATGTAGGTGGACACTTGTTAAATGCAACAACCATAGAACACTGCATTTTAAGGCTTCCATATCACTGGAAATATCTAAATTCCAAACAAACATTATCAAAGGAAGTAAATAATCATGAAATGAAAGTAAGAAGCATTTATGGTTTGGAATTGTCAGAACCTCTTGTCACATTTGCTCTCTCGTGTGGAACTTGGTCCTCTCCTGCTGTTCGAGTTTACACAGCATCTCGTGTTGAGAAGGAACTCGAAGAGGCGAAAAGAGAATACTTACAAGCTGCAGTTGGAATTACAAGATCAAAGTTTGTTATTCCAAAGATGTTAGATTGGTATTTACTTGACTTTGCAAAAGACATGGAATCATTAATGGACTGGATATGCCTCCAATTACCAAGTGAACAAGGAAAAGAAGCAATCAAGTTCCTTGACAAAAGAAAAAACCAACCTCTCTCACAATTTGTAAAAATCATGCCATATGAGTTTAGTTTTAGATACTTGCTATGCACATAG 1620 0.3728 MNTTVRTRMQPRKAPMSHEKEEMKGSSQKGMRNEVKDRKLALQQDVERLKNKLRHEENISKALERALNRPLGALPRLPPYLPPYTLGLVAEVAVLEEEIVRLEEKVLNFRQDLYQEAVYMSSSKMKLENSAASSVNNANPNNSTKLINAAKSGTRLTTALPDDKQGKSIQSSAHSFKCSKQSICKDQMTKTPIKKIPSENKSLHTRLKPPNKQQQELRLNNKPTAEVRNHRLHETLSGDESPNIISENILKCLTSILLRMSTLKNQVSAEYSDPYGILVFGMRDIGPYKQLCSSIEAESFNPTQTAKSLFVLHRLKYLRKLACVNIENLNHQEKLAFWINIYNACMMNAFIENGIPESPEMVVALMQKATINVGGHLLNATTIEHCILRLPYHWKYLNSKQTLSKEVNNHEMKVRSIYGLELSEPLVTFALSCGTWSSPAVRVYTASRVEKELEEAKREYLQAAVGITRSKFVIPKMLDWYLLDFAKDMESLMDWICLQLPSEQGKEAIKFLDKRKNQPLSQFVKIMPYEFSFRYLLCT 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02730 539 MobiDBLite consensus disorder prediction 1 36 - -
Car05g02730 539 Pfam Leucine-zipper of ternary complex factor MIP1 36 116 IPR025757 -
Car05g02730 539 MobiDBLite consensus disorder prediction 196 217 - -
Car05g02730 539 PANTHER TRANSCRIPTION FACTOR 1 538 - -
Car05g02730 539 MobiDBLite consensus disorder prediction 12 36 - -
Car05g02730 539 PANTHER EXPRESSED PROTEIN 1 538 - -
Car05g02730 539 Coils Coil 85 112 - -
Car05g02730 539 Coils Coil 32 66 - -
Car05g02730 539 Pfam Protein of unknown function, DUF547 327 461 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02730 Car-Chr5 72392704 72395704 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02730 05 72392704 72395704 Car05g02730 05 72392704 72395704 ECH
Car04g03462 04 63668555 63672038 Car05g02730 05 72392704 72395704 PCT