Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02314 ATGGAAAATCCTTGTTCAAAAGAAGCACCTATGTTAGAAAGAAGAGCAAGGCCACAAAAGGATCAAGCTTTGAACTGTCCAAGAAGGTATTGGACTGAAGGTGGTTCTTTAAGAAATGTTCCTGTTGGTGGTGGTTCAAGAAAAAACAAAAGatcaactccatcatcaccatcaccatcatcctcacAAATTCCATCTTCAACAATAACTAAAAATATTATTCTCAATAATCATGATTTAGCCTCACAAAATAATAATACTAATTTCCCTCATTCAGCTTCTCAAAACCCTAAGATCCATCAAGGTCAAGATCTTAACCTAGCTTATCCACCACCACAAGAAGATTACAACACTTTATCTAAATTCATTGAACTTCCTTATGAACAAGATAAACCtaatactactactactactaataataataataataataatTCTTCATCATCACCATCTTCTCATTTGTCAGCTATGGAGCTTTTGAAAACTGGTATTGTAAATTCTTCATCATCATCAAGGGGTTTGAATTCAACAAATTTTATGATGCCTATGAGTATATCAGAGAGTAGTGCTGCTGCTGCTGCAATGTATAATTCAACAGGGTTTGCTAATTTGCAAGATTTTAAACCTGGTCTTAACTTCAGTGTTGTTGAAGGGTTTGAAAATGGTTATGGTGGTTTAGAAGGGATTGAAGAAAGTGGTTCTGGTGCAAGGATGTTGTTTCCTGTTGAAGAGATGAAGCAACAAGTTCCAAGTAGTGATCATGAGTTTGATGAGCAGAATAATATTAATACTAGAAATCAAGGTGATTCAAGTGGGTTTTGGAATGGTATGTTAGGTGGAGGATCATGGTAG 852 0.3263 MENPCSKEAPMLERRARPQKDQALNCPRRYWTEGGSLRNVPVGGGSRKNKRSTPSSPSPSSSQIPSSTITKNIILNNHDLASQNNNTNFPHSASQNPKIHQGQDLNLAYPPPQEDYNTLSKFIELPYEQDKPNTTTTTNNNNNNNSSSSPSSHLSAMELLKTGIVNSSSSSRGLNSTNFMMPMSISESSAAAAAMYNSTGFANLQDFKPGLNFSVVEGFENGYGGLEGIEESGSGARMLFPVEEMKQQVPSSDHEFDEQNNINTRNQGDSSGFWNGMLGGGSW 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02314 283 MobiDBLite consensus disorder prediction 46 67 - -
Car05g02314 283 MobiDBLite consensus disorder prediction 254 283 - -
Car05g02314 283 MobiDBLite consensus disorder prediction 1 67 - -
Car05g02314 283 MobiDBLite consensus disorder prediction 80 102 - -
Car05g02314 283 MobiDBLite consensus disorder prediction 129 153 - -
Car05g02314 283 MobiDBLite consensus disorder prediction 254 273 - -
Car05g02314 283 Pfam Dof domain, zinc finger 26 51 IPR003851 GO:0003677|GO:0006355
Car05g02314 283 MobiDBLite consensus disorder prediction 1 22 - -
Car05g02314 283 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 28 280 IPR045174 GO:0003700|GO:0006355
Car05g02314 283 PANTHER DOF ZINC FINGER PROTEIN DOF4.6-LIKE 28 280 - -
Car05g02314 283 MobiDBLite consensus disorder prediction 80 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02314 Car-Chr5 68340712 68342074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02314 9 283 C2C2-Dof Transcription Factor Family AT3G61850 30.915 5.56e-24 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car05g02314 zf-Dof 6.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02314 - - cam:101493540 474.937