Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02307 ATGGCGTTGACAACCCCACAAATACAAAGATTCCTTTTAAGTAAGTTCCACAGACGCTCcaccacttccaaatccaaaaccccccacacaaacataaactcaaacaccttcaccatcaccaacaccagaagaagaagaagaagaagCCGGTGCTTCTCTGCCATAGCCATTGATGCCCCTTCTTCTTTGACGGACTCTCCTCCTATAAGATGGGGATCCGTATCTTTGCAAGGCCCCCGCGAAGAAATGGAAGATGATATTGTTCTTCGACCCAATACTCTTCAAGGTTTCTCTTTCGCTGCTGTCTTTGATGGCCATGGAGGGTTTTCTTCTGTTCAGTTTCTTAGGGACGAGCTGTACAAGGAGTGCCTTGAAGCTCTACAGGGTGGGTTACTATTGCTAGGAAAAGATTTCAAAGCTGTTGAAGAAGCATTAAAACATGCATTTATTAAGGCTGACATGAGGTTGTTAAAATGGCTTGAATTGAATGGGGAGGAGGATGAATCAGGTGCTACAGCAACTGCTATGTTCGTAGGAGATAATAAGCTACTAATTTCACATGTTGGTGACTCATCTGTGGTTTTATGCAGATCTGGAAAACCAGAATTACTGACTAGTCCGCACCGTCCCTATGGGAGCAACAAGGCTTCTCTTCAAGAAATCAAAAGAATCAGAGAAGCAGGTGGATGGATTGTCAATGGAAGGATTTGTGGAGATATTTCAATATCTCGTGCATTTGGGGACATGCGATTCAAAACAAAGAAGAATGAGATGCTACGAAAAGGAGCCCAGGAAGGAAGATGGACGGAAAAGTTCATTTCTCGTGTACAGTTCAACAATGACTTGGTTGTTGCATGCCCTGATATTTATCAAGTAGCTCTTGGCTCAGATGCAGAATTCATAGTGTTAGCATCCGATGGCTTATGGGATTACATGAGCAGCTCAGATGCAGTTACTTTTGTGAGGGATCAACTACGACAACATGGAAACACACAGCTAGCTTGTGAATCCCTTGCACAAGTCGTTTTGGACCAACAACGTACACAGGATAACGTCAGCATTATAATTGCCGATCTAGGGAAGACAGACTGGCAGAATGTGCCACTGCAGCAACAAAATGTCATATTAGAGCTAGTCCAAGCCATTGCCACAATTGGAATTGTGTCTATTGGAGTCTGGTTTTCATCACAGCTATCTTTATAG 1203 0.4023 MALTTPQIQRFLLSKFHRRSTTSKSKTPHTNINSNTFTITNTRRRRRRSRCFSAIAIDAPSSLTDSPPIRWGSVSLQGPREEMEDDIVLRPNTLQGFSFAAVFDGHGGFSSVQFLRDELYKECLEALQGGLLLLGKDFKAVEEALKHAFIKADMRLLKWLELNGEEDESGATATAMFVGDNKLLISHVGDSSVVLCRSGKPELLTSPHRPYGSNKASLQEIKRIREAGGWIVNGRICGDISISRAFGDMRFKTKKNEMLRKGAQEGRWTEKFISRVQFNNDLVVACPDIYQVALGSDAEFIVLASDGLWDYMSSSDAVTFVRDQLRQHGNTQLACESLAQVVLDQQRTQDNVSIIIADLGKTDWQNVPLQQQNVILELVQAIATIGIVSIGVWFSSQLSL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02307 400 ProSitePatterns PPM-type phosphatase domain signature. 99 107 IPR000222 GO:0043169
Car05g02307 400 SUPERFAMILY PP2C-like 64 360 IPR036457 -
Car05g02307 400 SMART PP2C_4 60 357 IPR001932 -
Car05g02307 400 ProSiteProfiles PPM-type phosphatase domain profile. 70 359 IPR001932 -
Car05g02307 400 Pfam Protein phosphatase 2C 72 348 IPR001932 -
Car05g02307 400 PANTHER PROTEIN PHOSPHATASE 2C 10 396 IPR015655 GO:0004722|GO:0006470
Car05g02307 400 CDD PP2Cc 69 359 IPR001932 -
Car05g02307 400 PANTHER PROTEIN PHOSPHATASE 2C 57 10 396 - -
Car05g02307 400 Gene3D - 69 366 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02307 Car-Chr5 68258876 68262850 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02307 05 68258876 68262850 Car04g03474 04 63790917 63793617 PCT