Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00302 ATGGAGATGTCTATGCAGCAAGAAAATTCTGATATCAAGAGTATATCAGGGGAGAGGAGATTTGAAAATTCTGGCGTTCGGCCGGGAGGGTCAGGATCTTGCCTCTATGATCTCTTCTGCTGTGAAACACCAAGTTTGAATAGTCAAAGTCAAAGGGAGCAATGGATGTTATATGGTCCACAGGAAAGGTTAGATAATTTGATGCGTCAAGCTGGGAACAAGTTCTGCGCTGACTGTGGATCATCGGACCCAAAATGGGTGTCTTCAAGTCTTGGAGTATTTATTTGCATAAAGTGCTCTGGTATACACAGAAGCCTAGGAGTACATATATCTAAGGTTCTGTCACTGAATCTAGATGATTGGACCGATGAACAAGTTGATGCATTGGTCAATTTGGGTGGAAATACGGTAATCAATAAAAAGTATGAAGCTTGCCTTCCAAGTTACATAAAAAAACCAAAACCAACTTCTTCCATTGAGGAGCGCTCTGATTTTATTAGGAGAAAATATGAGCTGCAACAGTTTGTGGATTCTGAGGAGAATTTGACTTGTCCCTTTATACCATCCCATGCAAGAAGTTCTTCATCCAGTCATAGTAGTTCCTCATACAACAATCCTCCACAAGACAAAAAACGTTATGATAAACAAACAACTAAAAATCGAATTGGGCTATCCTTTCGAAACAGTTGGGGAAGAAAAGAATCTGAGAGTAAGAGTACAAAGAAGAGTAACTCATTGGCAGGTATGGTTGAATTTATTGGATTGATTAAGGTTAATGTTGTTAAAGGAACTAACCTCGCTATCCGAGACTTAATGACTAGTGACCCTTATGTCATTCTTTCTCTTGGTCACCAATCGGTGAAGACACGTGTCATAAAGAGCAATTTAAATCCAGTTTGGAATGAAAGCTTAATGTTGTCAATTCCTGAGAGCATCCCTCCTCTTAAAGTGATTGTATATGACAAGGATTCATTCAAAACGGATGATTTTATGGGTGAGGCTGAAATTGACATTCAACCTCTAGTATCAGCAGCAAAGGCATATGAGAAATCATCAATCAATGAGTCCATGCAGCTTGGAAAATGGGTAGCAAGTGGTGACAACACACTTGTGAAAGATGGAATCATCTCCCTTGAAGAAGGGAAAGTGAGGCAAGAAATCTCATTGAGACTACAAAATGTTGAGAGAGGTGTCCTTGAAATTGAGCTTGAATGTGTTCCTCTTACTCAATAG 1233 0.395 MEMSMQQENSDIKSISGERRFENSGVRPGGSGSCLYDLFCCETPSLNSQSQREQWMLYGPQERLDNLMRQAGNKFCADCGSSDPKWVSSSLGVFICIKCSGIHRSLGVHISKVLSLNLDDWTDEQVDALVNLGGNTVINKKYEACLPSYIKKPKPTSSIEERSDFIRRKYELQQFVDSEENLTCPFIPSHARSSSSSHSSSSYNNPPQDKKRYDKQTTKNRIGLSFRNSWGRKESESKSTKKSNSLAGMVEFIGLIKVNVVKGTNLAIRDLMTSDPYVILSLGHQSVKTRVIKSNLNPVWNESLMLSIPESIPPLKVIVYDKDSFKTDDFMGEAEIDIQPLVSAAKAYEKSSINESMQLGKWVASGDNTLVKDGIISLEEGKVRQEISLRLQNVERGVLEIELECVPLTQ 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00302 410 SMART C2_3c 255 350 IPR000008 -
Car05g00302 410 ProSiteProfiles ARF GTPase-activating proteins domain profile. 61 183 IPR001164 GO:0005096
Car05g00302 410 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 3 410 - -
Car05g00302 410 Pfam C2 domain 255 345 IPR000008 -
Car05g00302 410 CDD ArfGap 64 170 - -
Car05g00302 410 Gene3D C2 domain 252 407 IPR035892 -
Car05g00302 410 MobiDBLite consensus disorder prediction 189 207 - -
Car05g00302 410 PRINTS HIV Rev interacting protein signature 73 92 IPR001164 GO:0005096
Car05g00302 410 PRINTS HIV Rev interacting protein signature 92 109 IPR001164 GO:0005096
Car05g00302 410 PRINTS HIV Rev interacting protein signature 113 134 IPR001164 GO:0005096
Car05g00302 410 CDD C2_ArfGAP 253 397 - -
Car05g00302 410 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 3 410 IPR044518 GO:0005096|GO:0005543
Car05g00302 410 Gene3D Arf GTPase activating protein 44 183 IPR038508 -
Car05g00302 410 SMART arf_gap_3 62 183 IPR001164 GO:0005096
Car05g00302 410 ProSiteProfiles C2 domain profile. 237 352 IPR000008 -
Car05g00302 410 MobiDBLite consensus disorder prediction 189 218 - -
Car05g00302 410 Pfam Putative GTPase activating protein for Arf 62 178 IPR001164 GO:0005096
Car05g00302 410 SUPERFAMILY ArfGap/RecO-like zinc finger 61 177 IPR037278 -
Car05g00302 410 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 251 345 IPR035892 -
Car05g00302 410 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00302 Car-Chr5 15164308 15172692 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00302 05 15164308 15172692 Car07g02544 07 48368574 48372032 PCT