Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00235 ATGGGTGCAGGTGAAGATCTTGTAAACAATGCAGCTAATGCTGCTGAGAATCCTGTAAACGATGCCACTGGTACTACAGAAAACTCTATAACTAATACAGGAGATTCTTCGGAAAATGCTGAAAACGCTGTTGATGTGGAAAACCATACAAAGGACCAAATAAATGTTGCAGAAAATCCTACATATGACCAAGCAGGTTGTGCAGCAAACCCGAGAAATGACCAAAAATGTAGTGAAGAATATCCAGCAAAGGACGATGCAGGTGACGATTCTACAAAGGACCAAGTAGGTGGTGCAGAAAATCCTGTAGACGATCAAGAAGGTGATGCAGAAAATCCTTTAAATGACACAGCAGGTGGTACGGAAGATATAGTAAATGATAAAACAGGTGGTGCAGAAACAGAAACTCCTATAAATGACCAATTAAATGTTGCAGAAAATCCTGCGAATGACCAAGCAGGTGGTGCAGCAAATCTGGTGAATGAGCAAGCATGTAGTGCAGAATATCGAGTAAAGGAAGAAGCAGGTGATGATTCTACAAAGGACCAAGAAGGTGGTGCAGAAAATTCTGTAAATGACACATCAGGTGGTTCAGACAATTTTATGAATAATGAAGCACATGCTGCTGAAAATTCCACAAATGATATAGCAGGTGATTATGAAACAGAAAACTCCATGAATGACAAAACAGGTGATGATGAAATACCTGTAAACAACAACGACAATGCTGTAGAAAATTCTTTTGACGACGAACAAGATGATGCAGAAAATCTTGTAGATACCATTGATACACTGTCAAACAGCGAAGATGATGATGTTGAAACCCCTGTAAGCAGCAAAATAGACCGCCTTCCAGAAGAAGCACAGGAGATACTGATATCAATGGCAGGTAAATGGGAGGATGTACTAGATGCAAGTGCATTGCAGGTGATCCCTCTCAAGGGGGCTATGACAAATGAGGTATTCCAAATAAAGTGGCCAGCTACAACTGGGGAAAACTCACGGAAGGTTCTAGTTAGAATCTATGGTGAGGGTGTGGACATTTTCTTTGATAGGGATGATGAAATACGAACCTTTGAGTACATGTCAAAGAATGGTCAGGGACCTCGTCTACTGGGACGTTTTACAAATGGACGCGTTGAAGAGTTTATCCATGCACGGACATTGTCAGCTTCTGATCTACGTGATCCATCTATTTCTGCTCTTATAGCGGCCAAAATGAAGGAGTTTCATGATCTAGCTATGCCTGGTGAAAAGAAAGTCAATCTTTGGCGCACATTGAGAACTTGGCTTAGTGAGGCCAAACGTTTGTCTTCTCCAAAGGAAGTCGAAGCTTTTTATTTGGATACAGTGGACAAGGAAATCTCTATTTTGGAAAAGGAACTATCAGGAGCACATCAACGGATAGGATTTTGCCACAATGATTTACAATATGGTAACATAATGCTTGATGAAGAGACCAATTCTGTGACCATAATAGATTATGAATATGCAAGTTACAATCCTGTAGCGTATGATATAGCAAACCACTTCTGTGAGATGGCTGCAAACTATCATACAAAAATGCCTCATATTCTTGATTACAACAAATATCCTGATTTTCAGGAGCGTGAACTATTTATTAGGGCATATTTGTGGTCCTCAGGTGAACAACCAAGTGTGAGTGAAGTGGAGCATCTCCTTCAAGAAGTTGAGAAGTATACACTTGCAAATCATCTATTCTGGGGACTTTGGGGAATAATTTCGGGACAAGTAAACACAATTGAGTTTGACTACAAGGAATATGCAAAACAGAGGTTTCAAGAATATTGGGCAAGGAAACCATATCTTCTGAGCTCTGATGCACCTTCTCCTTTTAATGTCCCTGAGGGTACAGGAGAACTTGCTTCGGTAGTGCACGCCAGAGGAACGAAGAACACTGGTATCTTCAGGAAGATGAAGAGAGTTTTGGGTGTTGGCTTGTTCAGGTCGAAAAGCTAA 1980 0.4076 MGAGEDLVNNAANAAENPVNDATGTTENSITNTGDSSENAENAVDVENHTKDQINVAENPTYDQAGCAANPRNDQKCSEEYPAKDDAGDDSTKDQVGGAENPVDDQEGDAENPLNDTAGGTEDIVNDKTGGAETETPINDQLNVAENPANDQAGGAANLVNEQACSAEYRVKEEAGDDSTKDQEGGAENSVNDTSGGSDNFMNNEAHAAENSTNDIAGDYETENSMNDKTGDDEIPVNNNDNAVENSFDDEQDDAENLVDTIDTLSNSEDDDVETPVSSKIDRLPEEAQEILISMAGKWEDVLDASALQVIPLKGAMTNEVFQIKWPATTGENSRKVLVRIYGEGVDIFFDRDDEIRTFEYMSKNGQGPRLLGRFTNGRVEEFIHARTLSASDLRDPSISALIAAKMKEFHDLAMPGEKKVNLWRTLRTWLSEAKRLSSPKEVEAFYLDTVDKEISILEKELSGAHQRIGFCHNDLQYGNIMLDEETNSVTIIDYEYASYNPVAYDIANHFCEMAANYHTKMPHILDYNKYPDFQERELFIRAYLWSSGEQPSVSEVEHLLQEVEKYTLANHLFWGLWGIISGQVNTIEFDYKEYAKQRFQEYWARKPYLLSSDAPSPFNVPEGTGELASVVHARGTKNTGIFRKMKRVLGVGLFRSKS 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00235 659 MobiDBLite consensus disorder prediction 1 254 - -
Car05g00235 659 Gene3D Phosphorylase Kinase; domain 1 297 383 - -
Car05g00235 659 SUPERFAMILY Protein kinase-like (PK-like) 275 610 IPR011009 -
Car05g00235 659 Pfam Choline/ethanolamine kinase 334 535 - -
Car05g00235 659 PANTHER CHOLINE/ETHANOALAMINE KINASE 272 618 - -
Car05g00235 659 MobiDBLite consensus disorder prediction 231 245 - -
Car05g00235 659 MobiDBLite consensus disorder prediction 132 159 - -
Car05g00235 659 PANTHER CHOLINE KINASE 2-RELATED 272 618 - -
Car05g00235 659 MobiDBLite consensus disorder prediction 77 93 - -
Car05g00235 659 MobiDBLite consensus disorder prediction 185 224 - -
Car05g00235 659 Coils Coil 448 468 - -
Car05g00235 659 MobiDBLite consensus disorder prediction 167 184 - -
Car05g00235 659 CDD ETNK_euk 308 606 - -
Car05g00235 659 Gene3D - 343 604 - -
Car05g00235 659 MobiDBLite consensus disorder prediction 13 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00235 Car-Chr5 5622285 5631218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00235 274 613 Acyl Lipid Metabolism Gene Families AT1G74320 66.176 1.49e-170 489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00235 05 5622285 5631218 Car05g00235 05 5622285 5631218 ECH
Car05g00235 05 5622285 5631218 Car07g02488 07 46849056 46852744 PCT