Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00191 ATGTCTCACTCTCATCAAATAATTGAACAACCTACACAAAATTATGTTTGTTCAATTTGCTACAACAAAAGACCAAAACTTGATTACACAAGAAGAGATTTCACATATGCTGAGTTACATGCAGCCACACAAGGCTTTTCCATAAAGAATTTTCTTTCAGAAGGTGGATTTGGTTCTGTTTACAAAGGAGAGATTAATGGACAAAAAATTGCTGTTAAGCAATGTATACATGCAAGTTATAAACAAGAGAAGGAGTTTAAGAGTGAAGTTGATGCATTAAGTAAAGCAAGACATGAAAATGTTGTTGTGTTGCTTGGATCATGTTCTGAAGGAAACCATAGGCTTCTTGTCTATGAATTTGTTTGCAATGGTTCATTAGACCAACATTTATCACAACATTCTCGCAAGCCTCTTTGTTGGCAAGATAGGGTGAAAGTAGCTAATGGAGCTGCTAAAGGATTGCTATACCTACATCAGAACAATATCATACATAGAGATATAAAACCAAACAACATTCTTCTTACACATGATCATGAAGTAATGCTGGGTGATTTTGGTTTGGCAAAAATTGTAAGTGAAGAATTCTCATGTTCAGTTGAATGTCCTGGAAATCTAGCATATTGGGCACCAGAATATGCAGCATTTGGTAAAGTATCAAATAAAACAGATGTGTATTCTTTTGGTGTGGTTTTAGTTGAACTAATAACTGGAATGAGGACCACAGACAAAAGACTTGGAGGAAAAGGTCTAGTGGGATGGGCTAGATCACTACTAAGACAAGGGAACTGTAAAACACTTGTTGATGAAAGGATAATTGATTCTCATGACTGTCATCAACTCCTTTGGATGAGCCGTTTAGCTGGAAATTGTCTAAACAAGGATCCTCATAAACGATTGGATATGAATACAGTGGTCAAAGCTTTAATACATATAACGGAAGGTTGCACTAGCTGCATTGTGGGAAAAGACAGTAGAACCCTTTCCATGTCAGGCTATTCCAAGTCAAAAGATGATATGCATGACTCTTCAGAATCAGATGGTGAAAGTGGAAACATTGGTAGTAGTTCCAACAGTACAAAATGCAAAAAACACAAAATATAA 1101 0.3606 MSHSHQIIEQPTQNYVCSICYNKRPKLDYTRRDFTYAELHAATQGFSIKNFLSEGGFGSVYKGEINGQKIAVKQCIHASYKQEKEFKSEVDALSKARHENVVVLLGSCSEGNHRLLVYEFVCNGSLDQHLSQHSRKPLCWQDRVKVANGAAKGLLYLHQNNIIHRDIKPNNILLTHDHEVMLGDFGLAKIVSEEFSCSVECPGNLAYWAPEYAAFGKVSNKTDVYSFGVVLVELITGMRTTDKRLGGKGLVGWARSLLRQGNCKTLVDERIIDSHDCHQLLWMSRLAGNCLNKDPHKRLDMNTVVKALIHITEGCTSCIVGKDSRTLSMSGYSKSKDDMHDSSESDGESGNIGSSSNSTKCKKHKI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00191 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Car05g00191 366 Gene3D Transferase(Phosphotransferase) domain 1 121 324 - -
Car05g00191 366 Pfam Protein tyrosine and serine/threonine kinase 48 308 IPR001245 GO:0004672|GO:0006468
Car05g00191 366 ProSiteProfiles Protein kinase domain profile. 46 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00191 366 SUPERFAMILY Protein kinase-like (PK-like) 29 308 IPR011009 -
Car05g00191 366 PANTHER OS01G0253100 PROTEIN 4 339 IPR045271 GO:0004714|GO:0006468
Car05g00191 366 Gene3D Phosphorylase Kinase; domain 1 26 120 - -
Car05g00191 366 SMART serkin_6 46 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00191 366 PANTHER TYROSINE KINASE FAMILY PROTEIN 4 339 - -
Car05g00191 366 MobiDBLite consensus disorder prediction 330 366 - -
Car05g00191 366 PIRSF ILK 17 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00191 Car-Chr5 4617706 4622350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00191 31 315 Trihelix Transcription Factor Family AT5G38560 44.295 1.65e-72 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Car05g00191 PK_Tyr_Ser-Thr 2.6e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00191 05 4617706 4622350 Car07g02458 07 45970598 45976270 PCT