Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03625 atggagaAAACGGGTGGAATAGCAGTAGTATTGTCCGCGAAGGAGGCATTCGATAAGTTAGAGAAGGTTGGAGAAGGAACGTATGGGAAGGTGTACAGAGCAAGAGAGAAGGCTACTGGGAAGATCGTTGCTCTCAAGAAGACACGTCTCCACGAGGATGATGAAGGTGTCCCTCCCACCACTCTCCGTGAGATTTCCATTTTGCGAATGCTCTCTCGCGATCCCCATGTCGTCAGGTTATTGGATGTCAAACAAGGTCAGAACAAGGAAGGAAAAACAGTCCTCTACTTGGTCTTCGAGTACATGGATACTGATCTCAAGAAATTCATTCGCACTTTTCGTCAATCTGGAGACAACATCCCACCCACAATCACCAAAAGCTTGATGTACCAACTTTGCAAGGGCGTTGCTTTCTGCCATGGCCATGGAATCTTGCACAGGGACTTGAAGCCTCACAATCTCTTGATGGACCGAAAAACAATGATGCTCAAAATTGCTGATCTTGGGCTTGCTAGAGCGTTTACTGTGCCACTTAAGAAGTACACTCATGAGATACTAACCCTGTGGTATAGAGCTCCTGAAGTCCTTTTGGGGGCTACCCATTACTCAATGGCGGTGGATATGTGGTCTGTTGCCTGCATATTCGCTGAACTTGTTACCAAGCAAGCACTATTCCCTGGTGATTCTGAGCTGCAACAACTGCTTCATATATTCAGGCTGTTGGGGACTCCTAATGAAGAGATGTGGCCAGGTGTTAGTAAACTAATGAACTGGCACGAGTACCCTCAGTGGAGCCCTCAAAGTCTTTCAAAGGCTGTTCCGAATTTGGAAGAGGCTGGTCTGGATCTGCTCTCTCAAATGTTGCAATATGAACCTTCAAAGCGGATTTCTGCAAAGAAAGCTATGGAACATCCTTACTTTGATGGCCTGGACAAGACCAATCTTTAG 948 0.461 MEKTGGIAVVLSAKEAFDKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREISILRMLSRDPHVVRLLDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRTFRQSGDNIPPTITKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPLKKYTHEILTLWYRAPEVLLGATHYSMAVDMWSVACIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEEMWPGVSKLMNWHEYPQWSPQSLSKAVPNLEEAGLDLLSQMLQYEPSKRISAKKAMEHPYFDGLDKTNL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03625 315 SMART serkin_6 17 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03625 315 SUPERFAMILY Protein kinase-like (PK-like) 14 310 IPR011009 -
Car04g03625 315 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Car04g03625 315 ProSiteProfiles Protein kinase domain profile. 17 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03625 315 PANTHER - 11 314 - -
Car04g03625 315 Gene3D Transferase(Phosphotransferase) domain 1 105 314 - -
Car04g03625 315 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Car04g03625 315 Pfam Protein kinase domain 18 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03625 315 Gene3D Phosphorylase Kinase; domain 1 12 103 - -
Car04g03625 315 PANTHER CELL DIVISION PROTEIN KINASE 11 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03625 Car-Chr4 65702339 65704974 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Car04g03625 Pkinase 4.2e-71 CL0016